Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 COX5BP7-201ENST00000414780 274 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 USP9YP30-201ENST00000430729 455 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC12P31275 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC12P31275 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC12P31275 OR1H1P-201ENST00000448731 937 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AL691482.1-201ENST00000453255 87 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AP000873.1-201ENST00000463987 400 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXC12P31275 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXC12P31275 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC12P31275 PTP4A1P4-201ENST00000512479 322 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC12P31275 Y_RNA.661-201ENST00000516003 99 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 SCARNA15.2-201ENST00000516409 127 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 RNU6-1256P-201ENST00000516539 103 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC134698.5-201ENST00000519444 336 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC087369.1-201ENST00000520775 996 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC104576.1-201ENST00000524225 88 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC009643.1-201ENST00000532030 391 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 MIR3921-201ENST00000577308 85 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 OR1M4P-201ENST00000589199 287 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AL020997.2-201ENST00000602607 184 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 ELOCP5-201ENST00000604924 333 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AP002826.1-201ENST00000608835 315 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 AC005344.1-201ENST00000613391 459 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 AC091925.1-201ENST00000623204 462 ntBASIC4.33□□□□□ -1.72
HOXC12P31275 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXC12P31275 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXC12P31275 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXC12P31275 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC12P31275 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.32□□□□□ -1.72
HOXC12P31275 MTND5P30-201ENST00000452896 1731 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 Y_RNA.2-201ENST00000362330 96 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 RNU6-1115P-201ENST00000362490 106 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 Y_RNA.148-201ENST00000363557 117 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 RNU6-1329P-201ENST00000365664 107 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 RNA5SP332-201ENST00000391063 115 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 SNORA75.6-201ENST00000391318 127 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 EI24P1-201ENST00000416584 867 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AL353621.1-201ENST00000418219 243 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 RSL24D1P6-201ENST00000426934 401 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC097713.2-201ENST00000430199 356 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AL160004.2-201ENST00000432935 350 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 RPS24P13-201ENST00000442520 397 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 HMGN2P21-201ENST00000447764 270 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC245028.2-201ENST00000458673 253 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC12P31275 AC022493.1-201ENST00000492984 337 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXC12P31275 AC023141.12-201ENST00000512399 199 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 RNA5SP464-201ENST00000516251 108 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 RNU6-1046P-201ENST00000516538 107 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.32□□□□□ -1.72
HOXC12P31275 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.32□□□□□ -1.72
HOXC12P31275 AL157871.3-201ENST00000557231 293 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 LRRC37A5P-203ENST00000580181 585 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AC007938.3-201ENST00000604965 623 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC12P31275 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 PLCE1P1-201ENST00000622094 305 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.32□□□□□ -1.72
HOXC12P31275 AL732372.2-225ENST00000642124 456 ntBASIC4.32□□□□□ -1.72
HOXC12P31275 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC12P31275 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC12P31275 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HOXC12P31275 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
HOXC12P31275 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 OR5P1P-201ENST00000299512 925 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 Y_RNA.324-201ENST00000365165 102 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RNU6-331P-201ENST00000384724 107 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 SNORD73A-201ENST00000386062 65 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RNU6-1106P-201ENST00000390845 107 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 U3.32-201ENST00000408116 212 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 U3.35-201ENST00000408405 208 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 CYCSP33-201ENST00000414485 327 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RPS15AP6-201ENST00000420703 385 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms