Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 HMGN2P26-201ENST00000463169 339 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 RPL21P99-201ENST00000480369 423 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHA3P29320 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 AC117522.3-201ENST00000507974 584 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC098591.2-201ENST00000510152 315 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.71□□□□□ -1.82
EPHA3P29320 RAC1P2-201ENST00000511164 579 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.71□□□□□ -1.82
EPHA3P29320 Y_RNA.689-201ENST00000516589 107 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 RNU6-352P-201ENST00000516908 107 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 RN7SKP60-201ENST00000516985 239 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 RANP3-201ENST00000530970 276 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.71□□□□□ -1.82
EPHA3P29320 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.71□□□□□ -1.82
EPHA3P29320 MIR4277-201ENST00000578298 84 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.71□□□□□ -1.82
EPHA3P29320 BDH2P1-201ENST00000602288 736 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 RNU6-89P-201ENST00000606519 100 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AL365204.3-201ENST00000612448 685 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 AL355810.1-201ENST00000614629 552 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.71□□□□□ -1.82
EPHA3P29320 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA3P29320 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
EPHA3P29320 AC008725.1-201ENST00000605123 2263 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
EPHA3P29320 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHA3P29320 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
EPHA3P29320 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.7□□□□□ -1.82
EPHA3P29320 RNU6-116P-201ENST00000384042 109 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 RNU6-190P-201ENST00000384154 102 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 MIR3074-201ENST00000384885 81 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 MIR514A2-201ENST00000385131 88 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 MIR514A3-201ENST00000385132 88 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.7□□□□□ -1.82
EPHA3P29320 AL451054.2-201ENST00000420896 202 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 RPL21P112-201ENST00000434403 463 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 RPS29P31-201ENST00000446147 164 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.7□□□□□ -1.82
EPHA3P29320 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.7□□□□□ -1.82
EPHA3P29320 RPL21P11-201ENST00000461458 483 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 RPS23P7-201ENST00000466210 444 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 RN7SL385P-201ENST00000468873 276 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AC105137.1-201ENST00000484355 562 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.7□□□□□ -1.82
EPHA3P29320 RNU6-1038P-201ENST00000516516 104 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AC078814.3-201ENST00000553036 491 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AC006270.2-201ENST00000578523 652 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 MIR4697-201ENST00000582977 78 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 MIR4424-201ENST00000585257 86 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AC104763.2-201ENST00000604179 382 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHA3P29320 AL670379.4-201ENST00000605279 254 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AL359314.1-201ENST00000616913 261 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 uc_338.11-201ENST00000619132 160 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AL136221.1-201ENST00000621449 509 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHA3P29320 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.7□□□□□ -1.82
EPHA3P29320 MTND4P14-201ENST00000435799 1354 ntBASIC3.7□□□□□ -1.82
EPHA3P29320 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.7□□□□□ -1.82
EPHA3P29320 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
EPHA3P29320 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.69□□□□□ -1.82
EPHA3P29320 MTND4P35-201ENST00000604257 1375 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 DEFB108F-201ENST00000344638 222 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-600P-201ENST00000362524 99 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-797P-201ENST00000363101 109 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RN7SKP44-201ENST00000363602 316 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 SNORA32.2-201ENST00000384049 122 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-767P-201ENST00000384132 107 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 MIR514A1-201ENST00000385133 98 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-1148P-201ENST00000410992 104 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-387P-201ENST00000411331 105 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RPL21P66-201ENST00000426566 466 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 RPS6P12-201ENST00000432491 726 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 ERLEC1P1-201ENST00000433806 578 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 SNORA71B-202ENST00000439232 272 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHA3P29320 RPL21P8-201ENST00000465083 535 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 PPIAP15-201ENST00000479662 484 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.69□□□□□ -1.82
EPHA3P29320 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
EPHA3P29320 RNU6-685P-201ENST00000517088 95 ntBASIC3.69□□□□□ -1.82
EPHA3P29320 BTF3P12-201ENST00000519620 469 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms