Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 AP000542.1-201ENST00000448473 371 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC098862.1-201ENST00000504991 413 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 LTV1P1-201ENST00000510683 1237 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN4P29074 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN4P29074 MTCO1P47-201ENST00000523889 1271 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
PTPN4P29074 AC004486.1-201ENST00000546846 233 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.86□□□□□ -1.95
PTPN4P29074 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 AC021171.1-201ENST00000603137 706 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC018714.1-201ENST00000605028 208 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AL139344.1-201ENST00000605228 195 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 AC004908.2-201ENST00000609090 574 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC131902.3-201ENST00000611767 581 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC131159.1-201ENST00000621854 213 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN4P29074 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.86□□□□□ -1.95
PTPN4P29074 AC026241.1-201ENST00000517873 2142 ntBASIC2.86□□□□□ -1.95
PTPN4P29074 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
PTPN4P29074 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
PTPN4P29074 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.85□□□□□ -1.95
PTPN4P29074 MIR767-201ENST00000390228 109 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 RPL17P12-201ENST00000413391 526 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC011233.1-201ENST00000422812 283 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN4P29074 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN4P29074 MTND5P2-201ENST00000442927 1142 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 UBBP3-201ENST00000445497 241 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN4P29074 AL162389.1-201ENST00000449233 177 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC004924.1-201ENST00000480160 781 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 RPL23AP41-201ENST00000484754 458 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL049874.1-201ENST00000489560 388 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.85□□□□□ -1.95
PTPN4P29074 DUXAP5-201ENST00000529668 529 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC128657.1-201ENST00000549459 145 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC008751.2-201ENST00000597885 980 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AP000811.1-201ENST00000603803 651 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL357094.1-201ENST00000603845 844 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AP000787.2-201ENST00000604432 568 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC007998.5-201ENST00000622938 237 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AP000676.3-201ENST00000623299 569 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL138713.1-201ENST00000624026 2130 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AL356596.1-201ENST00000624230 379 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 AC006378.2-201ENST00000623178 2476 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN4P29074 AC009487.2-201ENST00000420969 6821 ntBASIC2.85□□□□□ -1.95
PTPN4P29074 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PTPN4P29074 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PTPN4P29074 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTPN4P29074 AL049641.1-201ENST00000441055 1948 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PTPN4P29074 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.84□□□□□ -1.95
PTPN4P29074 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PTPN4P29074 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTPN4P29074 SNORA23-201ENST00000365128 182 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 MIR592-201ENST00000384959 97 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.84□□□□□ -1.95
PTPN4P29074 AL109755.1-201ENST00000401791 649 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC092447.3-201ENST00000426027 686 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AL593851.1-201ENST00000426171 157 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 MTND1P20-201ENST00000430341 950 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN4P29074 AP000705.1-201ENST00000454567 350 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 ATG12P2-201ENST00000456830 416 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 LINC00888-204ENST00000487386 421 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC083906.5-201ENST00000503722 328 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC098799.2-201ENST00000509466 868 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC026407.1-201ENST00000518369 204 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN4P29074 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPN4P29074 MTATP6P15-201ENST00000527233 835 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTPN4P29074 AC087276.1-201ENST00000529659 480 ntBASIC2.84□□□□□ -1.95
PTPN4P29074 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.84□□□□□ -1.95
PTPN4P29074 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN4P29074 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN4P29074 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.84□□□□□ -1.95
PTPN4P29074 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms