Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ELOCP5-201ENST00000604924 333 ntBASIC3.96□□□□□ -1.78
CD40P25942 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 AC134503.1-201ENST00000633048 54 ntBASIC3.96□□□□□ -1.78
CD40P25942 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.96□□□□□ -1.78
CD40P25942 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 MFSD8-242ENST00000641690 4199 ntBASIC3.96□□□□□ -1.78
CD40P25942 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CD40P25942 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
CD40P25942 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
CD40P25942 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 DHX9P1-201ENST00000436565 3076 ntBASIC3.95□□□□□ -1.78
CD40P25942 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CD40P25942 AC005183.1-201ENST00000603687 1979 ntBASIC3.95□□□□□ -1.78
CD40P25942 MTND4P27-201ENST00000450813 1354 ntBASIC3.95□□□□□ -1.78
CD40P25942 MAPK10-320ENST00000641462 6696 ntBASIC3.95□□□□□ -1.78
CD40P25942 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 RNU6-593P-201ENST00000364716 112 ntBASIC3.95□□□□□ -1.78
CD40P25942 SNORD73A-201ENST00000386062 65 ntBASIC3.95□□□□□ -1.78
CD40P25942 RNU6-1197P-201ENST00000391183 107 ntBASIC3.95□□□□□ -1.78
CD40P25942 MIR548P-201ENST00000408336 84 ntBASIC3.95□□□□□ -1.78
CD40P25942 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.95□□□□□ -1.78
CD40P25942 RPL7AP25-201ENST00000423357 805 ntBASIC3.95□□□□□ -1.78
CD40P25942 RPS12P10-201ENST00000427031 377 ntBASIC3.95□□□□□ -1.78
CD40P25942 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.95□□□□□ -1.78
CD40P25942 MYL8P-204ENST00000431574 518 ntBASIC3.95□□□□□ -1.78
CD40P25942 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
CD40P25942 RPL23AP93-201ENST00000440847 484 ntBASIC3.95□□□□□ -1.78
CD40P25942 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.95□□□□□ -1.78
CD40P25942 TPT1P12-201ENST00000448968 492 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC139453.3-201ENST00000493276 369 ntBASIC3.95□□□□□ -1.78
CD40P25942 HMGB3P16-201ENST00000508037 287 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC025755.1-201ENST00000521306 278 ntBASIC3.95□□□□□ -1.78
CD40P25942 AP000827.1-201ENST00000527814 258 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.95□□□□□ -1.78
CD40P25942 AC100830.2-201ENST00000581636 240 ntBASIC3.95□□□□□ -1.78
CD40P25942 OR1M4P-201ENST00000589199 287 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC020910.2-201ENST00000603635 610 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC005034.5-201ENST00000604219 466 ntBASIC3.95□□□□□ -1.78
CD40P25942 AL080274.1-201ENST00000605565 220 ntBASIC3.95□□□□□ -1.78
CD40P25942 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 AC006023.2-201ENST00000609916 167 ntBASIC3.95□□□□□ -1.78
CD40P25942 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.95□□□□□ -1.78
CD40P25942 RMST_4.1-201ENST00000616886 107 ntBASIC3.95□□□□□ -1.78
CD40P25942 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.95□□□□□ -1.78
CD40P25942 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.95□□□□□ -1.78
CD40P25942 AC139713.2-215ENST00000641428 5037 ntBASIC3.95□□□□□ -1.78
CD40P25942 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.95□□□□□ -1.78
CD40P25942 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 MTCO1P12-201ENST00000414273 1543 ntBASIC3.95□□□□□ -1.78
CD40P25942 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CD40P25942 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.95□□□□□ -1.78
CD40P25942 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 KPNA2P1-201ENST00000458289 1591 ntBASIC3.94□□□□□ -1.78
CD40P25942 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.94□□□□□ -1.78
CD40P25942 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 AC126755.2-208ENST00000327792 462 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC138969.1-213ENST00000331436 462 ntBASIC3.94□□□□□ -1.78
CD40P25942 MIR412-201ENST00000362142 91 ntBASIC3.94□□□□□ -1.78
CD40P25942 Y_RNA.128-201ENST00000363391 112 ntBASIC3.94□□□□□ -1.78
CD40P25942 Y_RNA.146-201ENST00000363549 102 ntBASIC3.94□□□□□ -1.78
CD40P25942 RNU6-474P-201ENST00000384243 107 ntBASIC3.94□□□□□ -1.78
CD40P25942 RNU6-306P-201ENST00000384617 107 ntBASIC3.94□□□□□ -1.78
CD40P25942 MIR659-201ENST00000384963 97 ntBASIC3.94□□□□□ -1.78
CD40P25942 U3.42-201ENST00000408746 214 ntBASIC3.94□□□□□ -1.78
CD40P25942 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 RNU4-25P-201ENST00000410569 230 ntBASIC3.94□□□□□ -1.78
CD40P25942 AL592148.1-201ENST00000413568 445 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC092573.2-201ENST00000434546 243 ntBASIC3.94□□□□□ -1.78
CD40P25942 NDUFB4P6-201ENST00000436819 366 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.94□□□□□ -1.78
CD40P25942 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.94□□□□□ -1.78
CD40P25942 MTCO3P10-201ENST00000455912 772 ntBASIC3.94□□□□□ -1.78
CD40P25942 Y_RNA.639-201ENST00000458981 102 ntBASIC3.94□□□□□ -1.78
CD40P25942 RPL21P126-201ENST00000470049 478 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC011005.2-201ENST00000487324 359 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.94□□□□□ -1.78
CD40P25942 AC093840.1-201ENST00000511599 336 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.94□□□□□ -1.78
CD40P25942 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 AC009902.1-201ENST00000519351 183 ntBASIC3.94□□□□□ -1.78
CD40P25942 TRMT10BP1-201ENST00000519377 943 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.94□□□□□ -1.78
CD40P25942 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.94□□□□□ -1.78
CD40P25942 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.94□□□□□ -1.78
CD40P25942 RN7SL435P-201ENST00000584418 282 ntBASIC3.94□□□□□ -1.78
CD40P25942 BNIP3P22-201ENST00000593399 556 ntBASIC3.94□□□□□ -1.78
CD40P25942 AC004805.2-201ENST00000605382 482 ntBASIC3.94□□□□□ -1.78
CD40P25942 MIR6758-201ENST00000620653 63 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms