Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 Y_RNA.357-201ENST00000365487 109 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 SNORA70.6-201ENST00000383934 134 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 SNORA70.10-201ENST00000384515 134 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SMPD1P17405 U3.29-201ENST00000391296 212 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 MTATP6P4-201ENST00000427725 675 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 AURKAPS2-201ENST00000454983 333 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 U8.22-201ENST00000459141 133 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 RPL23AP56-201ENST00000460778 453 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 RNA5SP392-201ENST00000516905 112 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.6□□□□□ -1.51
SMPD1P17405 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.6□□□□□ -1.51
SMPD1P17405 AC067852.4-201ENST00000590314 478 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 MIR15A-201ENST00000607334 83 ntBASIC5.6□□□□□ -1.51
SMPD1P17405 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SMPD1P17405 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMPD1P17405 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMPD1P17405 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMPD1P17405 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMPD1P17405 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.59□□□□□ -1.51
SMPD1P17405 AC007529.1-201ENST00000418574 2178 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
SMPD1P17405 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMPD1P17405 RNU6-729P-201ENST00000384399 107 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 RNU6-14P-201ENST00000384630 106 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 MIR578-201ENST00000384828 96 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AL357075.1-201ENST00000404107 726 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 MTND4LP9-201ENST00000427694 174 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC068287.1-201ENST00000430283 295 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC005002.2-201ENST00000438228 269 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.59□□□□□ -1.51
SMPD1P17405 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.59□□□□□ -1.51
SMPD1P17405 AC093815.1-201ENST00000508637 280 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.59□□□□□ -1.51
SMPD1P17405 AC098976.1-201ENST00000513014 541 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 RN7SKP276-201ENST00000516242 268 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 RNU6-390P-201ENST00000516259 103 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC136777.2-201ENST00000522979 358 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.59□□□□□ -1.51
SMPD1P17405 RN7SL652P-201ENST00000577769 300 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 MIR5692C2-201ENST00000577959 77 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC004852.3-201ENST00000614131 326 ntBASIC5.59□□□□□ -1.51
SMPD1P17405 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.59□□□□□ -1.51
SMPD1P17405 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SMPD1P17405 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SMPD1P17405 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SMPD1P17405 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SMPD1P17405 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.58□□□□□ -1.52
SMPD1P17405 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 RNU6-288P-201ENST00000363690 104 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 RNU6-818P-201ENST00000364837 108 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 MIR539-201ENST00000365690 78 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 SNORD51-201ENST00000384320 80 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 Y_RNA.571-201ENST00000384753 98 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 RNA5SP332-201ENST00000391063 115 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AL357139.1-201ENST00000407792 426 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 AC009963.2-201ENST00000453431 138 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AC234775.1-201ENST00000454247 670 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 RN7SL385P-201ENST00000468873 276 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AC010683.1-201ENST00000473673 378 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 RPS4XP22-201ENST00000480755 780 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 MIR3613-201ENST00000579844 87 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 RPL23AP78-201ENST00000599928 470 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 AC025588.3-201ENST00000604182 274 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMPD1P17405 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.58□□□□□ -1.52
SMPD1P17405 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
SMPD1P17405 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.58□□□□□ -1.52
SMPD1P17405 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SMPD1P17405 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SMPD1P17405 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
SMPD1P17405 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMPD1P17405 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.57□□□□□ -1.52
SMPD1P17405 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms