Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3□□□□□ -1.93
KRT3P12035 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3□□□□□ -1.93
KRT3P12035 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3□□□□□ -1.93
KRT3P12035 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KRT3P12035 AC123904.2-201ENST00000548059 300 ntBASIC3□□□□□ -1.93
KRT3P12035 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3□□□□□ -1.93
KRT3P12035 AL133153.1-201ENST00000557756 303 ntBASIC3□□□□□ -1.93
KRT3P12035 RPL23AP84-201ENST00000571193 464 ntBASIC3□□□□□ -1.93
KRT3P12035 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3□□□□□ -1.93
KRT3P12035 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
KRT3P12035 AC010133.1-201ENST00000615809 842 ntBASIC3□□□□□ -1.93
KRT3P12035 MIR7844-201ENST00000616161 122 ntBASIC3□□□□□ -1.93
KRT3P12035 AC012150.2-201ENST00000621300 544 ntBASIC3□□□□□ -1.93
KRT3P12035 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3□□□□□ -1.93
KRT3P12035 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3□□□□□ -1.93
KRT3P12035 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
KRT3P12035 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3□□□□□ -1.93
KRT3P12035 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT3P12035 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KRT3P12035 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KRT3P12035 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KRT3P12035 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KRT3P12035 Y_RNA.46-201ENST00000362695 102 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RNU6-223P-201ENST00000362830 107 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RNU1-140P-201ENST00000365040 165 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT3P12035 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 SNORA36C-201ENST00000384289 132 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RNY3P9-201ENST00000384727 106 ntBASIC2.99□□□□□ -1.93
KRT3P12035 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
KRT3P12035 MIR19A-201ENST00000384878 82 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RPS20P2-201ENST00000402520 389 ntBASIC2.99□□□□□ -1.93
KRT3P12035 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.99□□□□□ -1.93
KRT3P12035 BTF3L4P3-201ENST00000418879 476 ntBASIC2.99□□□□□ -1.93
KRT3P12035 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT3P12035 AL139281.1-201ENST00000422120 335 ntBASIC2.99□□□□□ -1.93
KRT3P12035 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT3P12035 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT3P12035 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT3P12035 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.99□□□□□ -1.93
KRT3P12035 AL590365.1-201ENST00000450788 243 ntBASIC2.99□□□□□ -1.93
KRT3P12035 NIPA2P5-201ENST00000452282 464 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.99□□□□□ -1.93
KRT3P12035 RNU7-59P-201ENST00000459101 61 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC008481.1-201ENST00000463278 396 ntBASIC2.99□□□□□ -1.93
KRT3P12035 RAC1P5-201ENST00000512182 576 ntBASIC2.99□□□□□ -1.93
KRT3P12035 SCARNA13-201ENST00000516672 275 ntBASIC2.99□□□□□ -1.93
KRT3P12035 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT3P12035 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.99□□□□□ -1.93
KRT3P12035 MTCO1P47-201ENST00000523889 1271 ntBASIC2.99□□□□□ -1.93
KRT3P12035 HPRT1P3-201ENST00000539521 576 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 AC022080.3-201ENST00000544433 482 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC123904.3-201ENST00000547218 814 ntBASIC2.99□□□□□ -1.93
KRT3P12035 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.99□□□□□ -1.93
KRT3P12035 AC091489.2-201ENST00000566263 604 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.99□□□□□ -1.93
KRT3P12035 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 AC002545.1-201ENST00000592511 181 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AF131215.7-201ENST00000602443 707 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AP000403.1-201ENST00000603349 851 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AL031775.1-201ENST00000607014 887 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC093838.1-201ENST00000613014 469 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC091564.4-201ENST00000533934 2194 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.99□□□□□ -1.93
KRT3P12035 GABRG2-229ENST00000641017 3628 ntBASIC2.99□□□□□ -1.93
KRT3P12035 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AC092447.7-201ENST00000422212 1621 ntBASIC2.98□□□□□ -1.93
KRT3P12035 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
KRT3P12035 SNORA70.4-201ENST00000365509 134 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AL109755.1-201ENST00000401791 649 ntBASIC2.98□□□□□ -1.93
KRT3P12035 RN7SKP140-201ENST00000411196 284 ntBASIC2.98□□□□□ -1.93
KRT3P12035 EEF1A1P41-201ENST00000414667 207 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT3P12035 AC109583.1-201ENST00000432156 268 ntBASIC2.98□□□□□ -1.93
KRT3P12035 NDUFB4P6-201ENST00000436819 366 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.98□□□□□ -1.93
KRT3P12035 AL445567.1-201ENST00000439121 144 ntBASIC2.98□□□□□ -1.93
KRT3P12035 BMI1P1-201ENST00000445879 941 ntBASIC2.98□□□□□ -1.93
KRT3P12035 COX6CP12-201ENST00000446748 202 ntBASIC2.98□□□□□ -1.93
KRT3P12035 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.98□□□□□ -1.93
KRT3P12035 RPS20P20-201ENST00000460498 340 ntBASIC2.98□□□□□ -1.93
KRT3P12035 S100A11P2-201ENST00000467589 312 ntBASIC2.98□□□□□ -1.93
KRT3P12035 RPS29P26-201ENST00000477483 171 ntBASIC2.98□□□□□ -1.93
KRT3P12035 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
KRT3P12035 RPL23AP41-201ENST00000484754 458 ntBASIC2.98□□□□□ -1.93
KRT3P12035 OR5BM1P-201ENST00000512021 366 ntBASIC2.98□□□□□ -1.93
KRT3P12035 SNORA70.24-201ENST00000517233 118 ntBASIC2.98□□□□□ -1.93
KRT3P12035 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.98□□□□□ -1.93
KRT3P12035 AC106038.2-201ENST00000520706 568 ntBASIC2.98□□□□□ -1.93
KRT3P12035 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT3P12035 AP000867.2-201ENST00000532468 320 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AL356432.3-201ENST00000568952 465 ntBASIC2.98□□□□□ -1.93
KRT3P12035 MIR548AB-201ENST00000584917 84 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.98□□□□□ -1.93
KRT3P12035 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.98□□□□□ -1.93
KRT3P12035 AC121334.2-201ENST00000605387 271 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms