Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCNAP12004 AC098848.2-201ENST00000588023 330 ntBASIC3.43□□□□□ -1.86
PCNAP12004 AC126118.1-201ENST00000607744 628 ntBASIC3.43□□□□□ -1.86
PCNAP12004 AC107294.3-201ENST00000609211 526 ntBASIC3.43□□□□□ -1.86
PCNAP12004 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.43□□□□□ -1.86
PCNAP12004 SDR42E1P2-201ENST00000614861 481 ntBASIC3.43□□□□□ -1.86
PCNAP12004 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.43□□□□□ -1.86
PCNAP12004 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.43□□□□□ -1.86
PCNAP12004 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.43□□□□□ -1.86
PCNAP12004 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCNAP12004 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCNAP12004 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCNAP12004 Y_RNA.6-201ENST00000362350 114 ntBASIC3.42□□□□□ -1.86
PCNAP12004 SNORD9-201ENST00000362566 104 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RNU6-1284P-201ENST00000363701 100 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AL359837.1-201ENST00000381357 287 ntBASIC3.42□□□□□ -1.86
PCNAP12004 MIR514A1-201ENST00000385133 98 ntBASIC3.42□□□□□ -1.86
PCNAP12004 MTCO3P40-201ENST00000392516 676 ntBASIC3.42□□□□□ -1.86
PCNAP12004 NDUFS5P1-201ENST00000405668 289 ntBASIC3.42□□□□□ -1.86
PCNAP12004 U3.39-201ENST00000408569 239 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RNU2-9P-201ENST00000410194 145 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RN7SKP202-201ENST00000410439 330 ntBASIC3.42□□□□□ -1.86
PCNAP12004 SDCBPP3-201ENST00000419629 891 ntBASIC3.42□□□□□ -1.86
PCNAP12004 YPEL5P1-201ENST00000419731 367 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.42□□□□□ -1.86
PCNAP12004 OR2AS1P-201ENST00000427827 319 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RPL21P40-201ENST00000428586 483 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AL353705.1-201ENST00000433468 480 ntBASIC3.42□□□□□ -1.86
PCNAP12004 GPR143P-201ENST00000434155 205 ntBASIC3.42□□□□□ -1.86
PCNAP12004 USP9YP28-201ENST00000435142 589 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.42□□□□□ -1.86
PCNAP12004 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.42□□□□□ -1.86
PCNAP12004 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PCNAP12004 AC023194.1-201ENST00000493084 308 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.42□□□□□ -1.86
PCNAP12004 AC010493.1-201ENST00000513479 292 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RNU2-10P-201ENST00000516375 211 ntBASIC3.42□□□□□ -1.86
PCNAP12004 RNU7-51P-201ENST00000516560 62 ntBASIC3.42□□□□□ -1.86
PCNAP12004 SNORA70.18-201ENST00000516696 98 ntBASIC3.42□□□□□ -1.86
PCNAP12004 SNORD59.2-201ENST00000516873 68 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AC093012.1-202ENST00000549403 582 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.42□□□□□ -1.86
PCNAP12004 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.42□□□□□ -1.86
PCNAP12004 TGIF1P1-201ENST00000558095 802 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AC010591.1-201ENST00000603941 649 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AP002360.4-201ENST00000606980 481 ntBASIC3.42□□□□□ -1.86
PCNAP12004 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.42□□□□□ -1.86
PCNAP12004 AL589994.2-201ENST00000621124 579 ntBASIC3.42□□□□□ -1.86
PCNAP12004 U4.6-201ENST00000621618 127 ntBASIC3.42□□□□□ -1.86
PCNAP12004 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
PCNAP12004 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCNAP12004 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCNAP12004 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCNAP12004 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
PCNAP12004 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCNAP12004 HSPE1P11-201ENST00000339579 310 ntBASIC3.41□□□□□ -1.86
PCNAP12004 DEFB108F-201ENST00000344638 222 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RNU1-64P-201ENST00000365443 163 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RNU6-805P-201ENST00000365643 106 ntBASIC3.41□□□□□ -1.86
PCNAP12004 SMIM11P1-201ENST00000369586 178 ntBASIC3.41□□□□□ -1.86
PCNAP12004 DEFB109C-201ENST00000382575 264 ntBASIC3.41□□□□□ -1.86
PCNAP12004 DEFB109B-201ENST00000382656 264 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RNU6-1103P-201ENST00000384150 107 ntBASIC3.41□□□□□ -1.86
PCNAP12004 MIR558-201ENST00000384920 94 ntBASIC3.41□□□□□ -1.86
PCNAP12004 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCNAP12004 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RPL17P50-201ENST00000396131 546 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RN7SKP140-201ENST00000411196 284 ntBASIC3.41□□□□□ -1.86
PCNAP12004 DBIP2-201ENST00000419076 262 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.41□□□□□ -1.86
PCNAP12004 RPL7L1P10-201ENST00000427790 463 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.41□□□□□ -1.86
PCNAP12004 USP12PX-201ENST00000432383 1057 ntBASIC3.41□□□□□ -1.86
PCNAP12004 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.41□□□□□ -1.86
PCNAP12004 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCNAP12004 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.41□□□□□ -1.86
PCNAP12004 HMGN2P13-201ENST00000476476 274 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RPS4XP22-201ENST00000480755 780 ntBASIC3.41□□□□□ -1.86
PCNAP12004 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.41□□□□□ -1.86
PCNAP12004 AC092185.1-201ENST00000491371 97 ntBASIC3.41□□□□□ -1.86
PCNAP12004 SAP18P1-201ENST00000512058 390 ntBASIC3.41□□□□□ -1.86
PCNAP12004 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.41□□□□□ -1.86
PCNAP12004 RN7SKP18-201ENST00000516005 275 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RNU6-579P-201ENST00000516879 102 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RNU1-45P-201ENST00000517191 141 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RANP9-201ENST00000519957 271 ntBASIC3.41□□□□□ -1.86
PCNAP12004 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.41□□□□□ -1.86
PCNAP12004 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.41□□□□□ -1.86
PCNAP12004 AL355836.1-201ENST00000555951 870 ntBASIC3.41□□□□□ -1.86
PCNAP12004 RPL21P12-201ENST00000559810 515 ntBASIC3.41□□□□□ -1.86
PCNAP12004 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.41□□□□□ -1.86
PCNAP12004 AC025449.1-201ENST00000603896 529 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AC107304.1-201ENST00000604229 296 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AC007619.2-201ENST00000605743 379 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
PCNAP12004 AC244100.1-202ENST00000621554 382 ntBASIC3.41□□□□□ -1.86
PCNAP12004 CR381653.2-201ENST00000624041 768 ntBASIC3.41□□□□□ -1.86
PCNAP12004 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
PCNAP12004 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.86
PCNAP12004 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms