Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MRPL3P09001 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 AC034159.1-201ENST00000513885 583 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.22□□□□□ -2.05
MRPL3P09001 RNA5SP367-201ENST00000516557 118 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 RPPH1-2P-201ENST00000516688 293 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.22□□□□□ -2.05
MRPL3P09001 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MRPL3P09001 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
MRPL3P09001 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 AC135628.1-201ENST00000568867 534 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 ISCA1P3-201ENST00000577104 373 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 MIR3944-201ENST00000581277 108 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 MIR5195-201ENST00000583555 115 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 OR1M4P-201ENST00000589199 287 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AP000811.1-201ENST00000603803 651 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 DUXAP11-201ENST00000603858 526 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 BCRP9-201ENST00000605312 388 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.22□□□□□ -2.05
MRPL3P09001 AL590099.1-201ENST00000615276 138 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AC073308.1-201ENST00000623696 305 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 CRYM-AS1-204ENST00000637983 556 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MRPL3P09001 MTND4P16-201ENST00000466108 1367 ntBASIC2.22□□□□□ -2.05
MRPL3P09001 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
MRPL3P09001 RNU6-270P-201ENST00000364131 105 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.21□□□□□ -2.06
MRPL3P09001 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
MRPL3P09001 RNU6-1207P-201ENST00000384343 107 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 MIR9-1-201ENST00000385198 89 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 MIR767-201ENST00000390228 109 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
MRPL3P09001 AL360182.1-201ENST00000397433 468 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 RNU6-193P-201ENST00000410977 107 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC083875.1-201ENST00000419509 405 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 USP9YP26-201ENST00000421008 661 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AC092427.1-202ENST00000430569 476 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 LARP1BP3-201ENST00000437229 869 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC105272.1-201ENST00000438604 198 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AL445567.1-201ENST00000439121 144 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 AL133217.1-201ENST00000450980 425 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 RPS3AP22-201ENST00000488297 769 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC093809.1-201ENST00000509155 340 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AC024589.1-201ENST00000512207 263 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 RNU6-759P-201ENST00000516740 103 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.21□□□□□ -2.06
MRPL3P09001 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
MRPL3P09001 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC008015.1-201ENST00000555505 465 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.21□□□□□ -2.06
MRPL3P09001 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.21□□□□□ -2.06
MRPL3P09001 ACTR3BP3-201ENST00000565577 979 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AC145350.1-201ENST00000567426 208 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AC068135.2-201ENST00000569293 1028 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 MIR544B-201ENST00000582372 78 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 UBE2L4-201ENST00000587688 464 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AL645944.1-201ENST00000603857 493 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 MIR92B-201ENST00000607575 96 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AL158801.5-201ENST00000623123 465 ntBASIC2.21□□□□□ -2.06
MRPL3P09001 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.21□□□□□ -2.06
MRPL3P09001 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
MRPL3P09001 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
MRPL3P09001 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
MRPL3P09001 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.2□□□□□ -2.06
MRPL3P09001 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
MRPL3P09001 DEFB108F-201ENST00000344638 222 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 RNU6-500P-201ENST00000362349 107 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 RNU6-859P-201ENST00000362728 107 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 Y_RNA.169-201ENST00000363745 96 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 RN7SKP266-201ENST00000410232 287 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 RNU2-43P-201ENST00000410306 190 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.2□□□□□ -2.06
MRPL3P09001 MTND5P25-201ENST00000430499 799 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AC090774.1-201ENST00000435925 246 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.2□□□□□ -2.06
MRPL3P09001 AL121871.1-201ENST00000443413 436 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.2□□□□□ -2.06
MRPL3P09001 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 SNORD121B-201ENST00000458838 81 ntBASIC2.2□□□□□ -2.06
MRPL3P09001 S100A11P2-201ENST00000467589 312 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms