Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC073073.2-201ENST00000609827 2578 ntBASIC3.42□□□□□ -1.86
RB1P06400 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RB1P06400 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RB1P06400 RNU1-70P-201ENST00000362618 164 ntBASIC3.41□□□□□ -1.86
RB1P06400 RNY4P16-201ENST00000364768 94 ntBASIC3.41□□□□□ -1.86
RB1P06400 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.41□□□□□ -1.86
RB1P06400 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RB1P06400 RN7SKP220-201ENST00000410611 288 ntBASIC3.41□□□□□ -1.86
RB1P06400 ELOCP17-201ENST00000414751 326 ntBASIC3.41□□□□□ -1.86
RB1P06400 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
RB1P06400 USP12PX-201ENST00000432383 1057 ntBASIC3.41□□□□□ -1.86
RB1P06400 TAAR7P-201ENST00000436141 242 ntBASIC3.41□□□□□ -1.86
RB1P06400 AC010631.1-201ENST00000474150 156 ntBASIC3.41□□□□□ -1.86
RB1P06400 KC877373.1-201ENST00000479066 408 ntBASIC3.41□□□□□ -1.86
RB1P06400 AC006483.1-201ENST00000487308 313 ntBASIC3.41□□□□□ -1.86
RB1P06400 RPL30P5-201ENST00000494923 336 ntBASIC3.41□□□□□ -1.86
RB1P06400 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.41□□□□□ -1.86
RB1P06400 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.41□□□□□ -1.86
RB1P06400 RNU6-390P-201ENST00000516259 103 ntBASIC3.41□□□□□ -1.86
RB1P06400 NRON-201ENST00000517270 370 ntBASIC3.41□□□□□ -1.86
RB1P06400 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
RB1P06400 AP003122.4-201ENST00000530980 758 ntBASIC3.41□□□□□ -1.86
RB1P06400 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.41□□□□□ -1.86
RB1P06400 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.41□□□□□ -1.86
RB1P06400 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
RB1P06400 MIR3118-1-201ENST00000581787 76 ntBASIC3.41□□□□□ -1.86
RB1P06400 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 AC008277.2-201ENST00000605196 797 ntBASIC3.41□□□□□ -1.86
RB1P06400 RNU6-87P-201ENST00000607561 108 ntBASIC3.41□□□□□ -1.86
RB1P06400 AC099506.2-201ENST00000623074 221 ntBASIC3.41□□□□□ -1.86
RB1P06400 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RB1P06400 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
RB1P06400 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.41□□□□□ -1.86
RB1P06400 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RB1P06400 MAPK10-362ENST00000641864 4484 ntBASIC3.4□□□□□ -1.86
RB1P06400 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
RB1P06400 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 Y_RNA.77-201ENST00000362962 107 ntBASIC3.4□□□□□ -1.87
RB1P06400 RNY3P13-201ENST00000365542 102 ntBASIC3.4□□□□□ -1.87
RB1P06400 RPS4XP3-201ENST00000398541 413 ntBASIC3.4□□□□□ -1.87
RB1P06400 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 AL359634.1-202ENST00000404721 284 ntBASIC3.4□□□□□ -1.87
RB1P06400 RN7SKP140-201ENST00000411196 284 ntBASIC3.4□□□□□ -1.87
RB1P06400 HMGN1P14-201ENST00000412459 517 ntBASIC3.4□□□□□ -1.87
RB1P06400 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.4□□□□□ -1.87
RB1P06400 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.4□□□□□ -1.87
RB1P06400 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.4□□□□□ -1.87
RB1P06400 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
RB1P06400 SSXP1-201ENST00000453640 473 ntBASIC3.4□□□□□ -1.87
RB1P06400 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.4□□□□□ -1.87
RB1P06400 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.4□□□□□ -1.87
RB1P06400 RPL31P3-201ENST00000458430 332 ntBASIC3.4□□□□□ -1.87
RB1P06400 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.4□□□□□ -1.87
RB1P06400 AC093534.1-201ENST00000504977 132 ntBASIC3.4□□□□□ -1.87
RB1P06400 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.4□□□□□ -1.87
RB1P06400 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RB1P06400 Y_RNA.695-201ENST00000516715 107 ntBASIC3.4□□□□□ -1.87
RB1P06400 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
RB1P06400 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
RB1P06400 AP003181.2-201ENST00000528941 181 ntBASIC3.4□□□□□ -1.87
RB1P06400 AC007115.1-201ENST00000546853 234 ntBASIC3.4□□□□□ -1.87
RB1P06400 RPL21P5-201ENST00000554662 472 ntBASIC3.4□□□□□ -1.87
RB1P06400 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
RB1P06400 PIGPP4-201ENST00000584447 307 ntBASIC3.4□□□□□ -1.87
RB1P06400 AC009977.1-201ENST00000586015 570 ntBASIC3.4□□□□□ -1.87
RB1P06400 BNIP3P8-201ENST00000597863 560 ntBASIC3.4□□□□□ -1.87
RB1P06400 AC108479.2-201ENST00000617314 601 ntBASIC3.4□□□□□ -1.87
RB1P06400 AL603839.4-201ENST00000624658 1005 ntBASIC3.4□□□□□ -1.87
RB1P06400 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.4□□□□□ -1.87
RB1P06400 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
RB1P06400 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.87
RB1P06400 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RB1P06400 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
RB1P06400 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RB1P06400 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RB1P06400 OR5J1P-201ENST00000313544 939 ntBASIC3.39□□□□□ -1.87
RB1P06400 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RB1P06400 FTLP6-201ENST00000355274 422 ntBASIC3.39□□□□□ -1.87
RB1P06400 RNU6-1284P-201ENST00000363701 100 ntBASIC3.39□□□□□ -1.87
RB1P06400 RNA5SP126-201ENST00000365092 109 ntBASIC3.39□□□□□ -1.87
RB1P06400 SNORD116-1-201ENST00000384335 95 ntBASIC3.39□□□□□ -1.87
RB1P06400 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
RB1P06400 RNU2-62P-201ENST00000410868 191 ntBASIC3.39□□□□□ -1.87
RB1P06400 RN7SKP142-201ENST00000411236 328 ntBASIC3.39□□□□□ -1.87
RB1P06400 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RB1P06400 AL451054.2-201ENST00000420896 202 ntBASIC3.39□□□□□ -1.87
RB1P06400 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
RB1P06400 RPL21P40-201ENST00000428586 483 ntBASIC3.39□□□□□ -1.87
RB1P06400 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.39□□□□□ -1.87
RB1P06400 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms