Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RNU6-1242P-201ENST00000391052 103 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AL513331.1-201ENST00000411908 397 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN9O95484 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC083875.1-201ENST00000419509 405 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN9O95484 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 RPL12P25-201ENST00000455592 494 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 MTND2P39-201ENST00000457230 764 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 RPS15AP36-201ENST00000492022 382 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AIG1P1-201ENST00000503376 148 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN9O95484 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC004486.1-201ENST00000546846 233 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN9O95484 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC103810.1-201ENST00000579873 453 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MIR3670-2-201ENST00000582974 65 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MIR3670-1-201ENST00000584160 65 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MIR3670-3-201ENST00000584855 65 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC060766.3-201ENST00000591442 263 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AC005498.1-201ENST00000592125 465 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN9O95484 AL596327.1-201ENST00000603629 213 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AP000787.2-201ENST00000604432 568 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MTND4LP5-201ENST00000605152 292 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AC007619.2-201ENST00000605743 379 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 AC080013.3-201ENST00000606839 578 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 MIR3670-4-201ENST00000612260 65 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN9O95484 AC010608.3-201ENST00000625048 527 ntBASIC2.48□□□□□ -2.01
CLDN9O95484 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.48□□□□□ -2.01
CLDN9O95484 CR848007.1-201ENST00000442354 1699 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AP000776.1-201ENST00000530032 1663 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC009902.3-201ENST00000606235 2172 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN9O95484 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLDN9O95484 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 RNU4-92P-201ENST00000363783 136 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL356057.2-201ENST00000403318 432 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 MTCO1P17-201ENST00000411522 491 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 BX682237.1-201ENST00000415016 335 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 NANOGP5-201ENST00000424456 877 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL358075.3-201ENST00000426289 226 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN9O95484 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 MTCO1P27-201ENST00000448269 226 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN9O95484 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 RPL7P18-201ENST00000478965 734 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC114786.4-201ENST00000508771 728 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC114797.1-201ENST00000514003 728 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 RNU6-390P-201ENST00000516259 103 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 CKS1BP7-201ENST00000522230 235 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC087276.1-201ENST00000529659 480 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC023538.1-201ENST00000534576 736 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC243972.3-201ENST00000539655 198 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN9O95484 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN9O95484 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN9O95484 AC022662.1-201ENST00000580252 331 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC090616.3-201ENST00000582184 217 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 OR1M4P-201ENST00000589199 287 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC104763.2-201ENST00000604179 382 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 ATP1B3P1-201ENST00000605365 821 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AL161734.1-201ENST00000609720 557 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN9O95484 PCMTD1P7-201ENST00000634506 357 ntBASIC2.47□□□□□ -2.01
CLDN9O95484 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLDN9O95484 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN9O95484 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN9O95484 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN9O95484 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN9O95484 RNU6-223P-201ENST00000362830 107 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 SET-203ENST00000372688 801 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN9O95484 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN9O95484 AL445529.1-201ENST00000398713 389 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 AC080125.1-201ENST00000414888 684 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 USP9YP24-201ENST00000434374 697 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 MTCO2P20-201ENST00000437339 673 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 AL117351.1-201ENST00000438864 766 ntBASIC2.46□□□□□ -2.02
CLDN9O95484 RPS12P2-201ENST00000439728 269 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms