Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.94□□□□□ -1.62
RAPGEF3O95398 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 Y_RNA.89-201ENST00000363031 102 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 RNU6-1090P-201ENST00000364065 94 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 U3.11-201ENST00000364476 212 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 RNU6-483P-201ENST00000384088 108 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL121834.1-202ENST00000404494 277 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 RNU4-78P-201ENST00000410940 126 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 RNU6-516P-201ENST00000411381 104 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL137014.1-201ENST00000420490 1226 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 BEND7P1-201ENST00000422058 457 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 HMGB1P31-201ENST00000437242 427 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 HMGB3P12-201ENST00000438745 556 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL662791.1-201ENST00000441992 928 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 Y_RNA.638-201ENST00000459374 113 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL049714.1-201ENST00000466686 347 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 RPL36AP51-201ENST00000487216 318 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 Y_RNA.704-201ENST00000516851 102 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 RNU6-410P-201ENST00000517006 107 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 AC104383.1-201ENST00000530297 370 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL158211.4-201ENST00000606988 584 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AC093838.1-201ENST00000613014 469 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 AL603758.1-201ENST00000618654 241 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.93□□□□□ -1.62
RAPGEF3O95398 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RAPGEF3O95398 AC073073.2-201ENST00000609827 2578 ntBASIC4.93□□□□□ -1.62
RAPGEF3O95398 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC018529.3-201ENST00000624212 2254 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 RNU6-223P-201ENST00000362830 107 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 RNU6-534P-201ENST00000364877 106 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 RNU6-637P-201ENST00000384050 107 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AL353193.1-201ENST00000421444 268 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC234775.1-201ENST00000454247 670 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.92□□□□□ -1.62
RAPGEF3O95398 RNU6-1281P-201ENST00000516223 105 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.92□□□□□ -1.62
RAPGEF3O95398 MIR4319-201ENST00000577285 85 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC098848.2-201ENST00000588023 330 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC008752.3-201ENST00000588113 712 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AP001429.1-201ENST00000602568 530 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AL162413.1-201ENST00000603198 110 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC007621.1-201ENST00000604544 437 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AL136363.1-201ENST00000605349 337 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.92□□□□□ -1.62
RAPGEF3O95398 DUXAP9-208ENST00000622815 614 ntBASIC4.92□□□□□ -1.62
RAPGEF3O95398 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RAPGEF3O95398 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC006504.1-201ENST00000562493 3666 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 Y_RNA.295-201ENST00000364918 102 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 RNU6-877P-201ENST00000383868 107 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 Y_RNA.390-201ENST00000383932 102 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 RNU6-432P-201ENST00000384196 109 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 MIR513A2-201ENST00000385249 127 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AL391417.1-201ENST00000404100 426 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 CALM1P1-201ENST00000442082 433 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 AL135938.1-201ENST00000443141 297 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC083798.1-201ENST00000472671 131 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 RNU6-1095P-201ENST00000516148 108 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 RNU2-10P-201ENST00000516375 211 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 NRON-201ENST00000517270 370 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 MTND1P35-201ENST00000526739 508 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AL133271.1-201ENST00000538229 291 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 HMGB1P6-201ENST00000569046 646 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC093788.1-201ENST00000609356 927 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.91□□□□□ -1.62
RAPGEF3O95398 AC006065.5-201ENST00000623427 349 ntBASIC4.91□□□□□ -1.62
RAPGEF3O95398 CR848007.1-201ENST00000442354 1699 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms