Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL590233.1-201ENST00000430017 456 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 ELOCP26-201ENST00000436067 329 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 IPO7P1-201ENST00000442031 636 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AL118520.1-201ENST00000450770 291 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 MRPL42P4-201ENST00000453267 443 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 OFD1P3Y-201ENST00000453312 783 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC092155.2-201ENST00000454675 477 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC022493.1-201ENST00000492984 337 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.18□□□□□ -2.06
SHOX2O60902 AC027338.1-201ENST00000514840 825 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.18□□□□□ -2.06
SHOX2O60902 HSPA8P13-201ENST00000523715 472 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 UBTFL10-201ENST00000528532 562 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.18□□□□□ -2.06
SHOX2O60902 HSPE1P3-201ENST00000559254 309 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.18□□□□□ -2.06
SHOX2O60902 MIR4498-201ENST00000577599 66 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHOX2O60902 AC090330.1-201ENST00000588646 764 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC004853.1-201ENST00000604902 698 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SHOX2O60902 AC093838.1-201ENST00000613014 469 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 AC007785.2-201ENST00000598627 1916 ntBASIC2.18□□□□□ -2.06
SHOX2O60902 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHOX2O60902 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.17□□□□□ -2.06
SHOX2O60902 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 Y_RNA.122-201ENST00000363331 96 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.17□□□□□ -2.06
SHOX2O60902 RNU6-354P-201ENST00000383862 107 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 RNU6-610P-201ENST00000384264 107 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MIR514A1-201ENST00000385133 98 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MIR325-201ENST00000385260 98 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.17□□□□□ -2.06
SHOX2O60902 SNORA3.2-201ENST00000408221 125 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AL592310.1-201ENST00000414330 671 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.17□□□□□ -2.06
SHOX2O60902 MTND4P15-201ENST00000437913 1033 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 COX6CP18-201ENST00000448769 222 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MTCO3P11-201ENST00000455103 774 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 RPS15AP17-201ENST00000470598 390 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 RPL21P99-201ENST00000480369 423 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.17□□□□□ -2.06
SHOX2O60902 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.17□□□□□ -2.06
SHOX2O60902 MRPS36P2-201ENST00000512569 299 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 RNU4-29P-201ENST00000515943 174 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MIR514B-201ENST00000516774 80 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 snoZ278.1-201ENST00000517059 112 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.17□□□□□ -2.06
SHOX2O60902 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.17□□□□□ -2.06
SHOX2O60902 ANP32BP3-201ENST00000559213 706 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
SHOX2O60902 MIR4781-201ENST00000585250 76 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AL355877.2-201ENST00000603670 358 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AC009314.1-201ENST00000603871 304 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.17□□□□□ -2.06
SHOX2O60902 AL354696.1-201ENST00000614652 497 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 PISRT1-201ENST00000626175 531 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 AL163152.1-201ENST00000642001 374 ntBASIC2.17□□□□□ -2.06
SHOX2O60902 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.17□□□□□ -2.06
SHOX2O60902 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SHOX2O60902 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SHOX2O60902 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SHOX2O60902 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 Y_RNA.25-201ENST00000362528 102 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RN7SKP226-201ENST00000364912 300 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 RNU6-468P-201ENST00000384003 109 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 MIR499A-201ENST00000384903 122 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 MIR524-201ENST00000385242 87 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RPL21P1-201ENST00000399532 476 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 MIR1289-2-201ENST00000408360 111 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RPL17P12-201ENST00000413391 526 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 LUZP4P1-201ENST00000415420 344 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.16□□□□□ -2.06
SHOX2O60902 AC018630.2-202ENST00000422992 927 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AL353729.1-201ENST00000425044 720 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 DPRXP1-201ENST00000426312 460 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 MTCO3P30-201ENST00000426425 670 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
SHOX2O60902 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.16□□□□□ -2.06
SHOX2O60902 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SHOX2O60902 RPL39P6-201ENST00000448289 150 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.16□□□□□ -2.06
SHOX2O60902 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.16□□□□□ -2.06
SHOX2O60902 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.16□□□□□ -2.06
SHOX2O60902 MTCYBP17-201ENST00000503579 789 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.16□□□□□ -2.06
SHOX2O60902 MIR449C-201ENST00000516047 92 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RNA5SP148-201ENST00000516527 94 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RNU6-1256P-201ENST00000516539 103 ntBASIC2.16□□□□□ -2.06
SHOX2O60902 RN7SKP219-201ENST00000516825 296 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms