Protein–RNA interactions for Protein: O60506

SYNCRIP, Heterogeneous nuclear ribonucleoprotein Q, humanhuman

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIPO60506 RNU4-75P-201ENST00000364621 146 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 RNU6-809P-201ENST00000384461 107 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 U3.20-201ENST00000390909 217 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 SAR1AP2-201ENST00000392696 594 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL359704.1-201ENST00000411586 781 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 PPP1R11P2-201ENST00000423543 382 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL353777.1-201ENST00000425552 326 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 RPL7L1P10-201ENST00000427790 463 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC092573.2-201ENST00000434546 243 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC008264.1-201ENST00000447612 367 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL033528.1-201ENST00000453780 140 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 TPT1P7-201ENST00000458300 517 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 KCTD9P5-201ENST00000504141 1170 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AP003467.2-201ENST00000520175 319 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC004024.1-201ENST00000549244 247 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC078795.2-201ENST00000602835 1252 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL359999.1-201ENST00000604513 294 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 NDUFA8P1-201ENST00000605525 367 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC109347.2-201ENST00000610220 349 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC131902.3-201ENST00000611767 581 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC009268.2-201ENST00000621925 457 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL359740.1-201ENST00000624340 592 ntBASIC3.37□□□□□ -1.87
SYNCRIPO60506 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SYNCRIPO60506 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 RNU1-75P-201ENST00000347264 129 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 SNORA48.5-201ENST00000391143 135 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL357075.1-201ENST00000404107 726 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 RNU6-516P-201ENST00000411381 104 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC078974.1-201ENST00000411597 223 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL049734.2-201ENST00000441066 616 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL022238.1-201ENST00000442557 355 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL049874.1-201ENST00000489560 388 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 RPL30P5-201ENST00000494923 336 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC006445.2-201ENST00000510061 472 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 RNU6-405P-201ENST00000516637 110 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 SNORA31.22-201ENST00000517204 135 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AP003033.1-201ENST00000527244 415 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 AP003122.4-201ENST00000530980 758 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 MTCO3P24-201ENST00000572729 782 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 MIR5004-201ENST00000579078 107 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC009977.1-201ENST00000586015 570 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC067852.3-201ENST00000589177 561 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 BNIP3P8-201ENST00000597863 560 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC087241.4-201ENST00000612441 480 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AL162274.2-201ENST00000614406 332 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC012150.2-201ENST00000621300 544 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 AC079597.1-201ENST00000624306 508 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.36□□□□□ -1.87
SYNCRIPO60506 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SYNCRIPO60506 FAM35BP-202ENST00000497389 3337 ntBASIC3.36□□□□□ -1.87
SYNCRIPO60506 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNCRIPO60506 RNA5SP374-201ENST00000362939 125 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 RNU5E-8P-201ENST00000363502 116 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 Y_RNA.359-201ENST00000365498 102 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNCRIPO60506 SNORA40.3-201ENST00000390964 122 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 RPS3AP3-201ENST00000411933 242 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 USP9YP13-201ENST00000417797 480 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AC018630.2-202ENST00000422992 927 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 USP9YP14-201ENST00000430663 563 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 ATP5C1P1-201ENST00000441945 895 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 MTND6P13-201ENST00000443510 523 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SYNCRIPO60506 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AL671855.1-201ENST00000446875 1203 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 MTCYBP1-201ENST00000454315 1119 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 snoU109.1-201ENST00000459339 135 ntBASIC3.35□□□□□ -1.87
SYNCRIPO60506 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.35□□□□□ -1.87
SYNCRIPO60506 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms