Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL021997.1-201ENST00000605757 193 ntBASIC1.12□□□□□ -2.23
SSSCA1O60232 MIR6845-201ENST00000613182 61 ntBASIC1.12□□□□□ -2.23
SSSCA1O60232 AC006338.1-201ENST00000618453 749 ntBASIC1.12□□□□□ -2.23
SSSCA1O60232 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
SSSCA1O60232 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
SSSCA1O60232 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
SSSCA1O60232 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
SSSCA1O60232 RNU4-26P-201ENST00000410270 107 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 RNA5SP450-201ENST00000411206 102 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AL035410.1-201ENST00000427409 427 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AL121601.2-201ENST00000438019 707 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC104164.3-201ENST00000467363 1258 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AC027575.1-201ENST00000481064 460 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.11□□□□□ -2.23
SSSCA1O60232 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SSSCA1O60232 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
SSSCA1O60232 TPT1P8-201ENST00000510120 555 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AC008834.1-201ENST00000511612 175 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 C1DP5-201ENST00000525775 383 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC084033.1-201ENST00000550830 633 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 YWHAZP1-201ENST00000556286 722 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.11□□□□□ -2.23
SSSCA1O60232 AC068620.4-201ENST00000636730 1182 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 AL161722.3-201ENST00000605789 2983 ntBASIC1.11□□□□□ -2.23
SSSCA1O60232 U8.1-201ENST00000362843 134 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.1□□□□□ -2.23
SSSCA1O60232 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.1□□□□□ -2.23
SSSCA1O60232 RNU6-203P-201ENST00000384038 104 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 MIR325-201ENST00000385260 98 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 EDDM3CP-201ENST00000415977 425 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.1□□□□□ -2.23
SSSCA1O60232 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.1□□□□□ -2.23
SSSCA1O60232 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.1□□□□□ -2.23
SSSCA1O60232 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.1□□□□□ -2.23
SSSCA1O60232 HMGB1P9-201ENST00000429856 646 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 MTND4LP10-201ENST00000435146 291 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.1□□□□□ -2.23
SSSCA1O60232 AC118469.1-201ENST00000442943 488 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 RPS29P21-201ENST00000496272 170 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AC022447.1-201ENST00000515358 464 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 RNU6-1095P-201ENST00000516148 108 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AC087465.1-201ENST00000560574 245 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AC008269.2-201ENST00000561915 1105 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 MIR3126-201ENST00000577443 74 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AL078605.1-201ENST00000603529 500 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AC021755.4-201ENST00000616620 456 ntBASIC1.1□□□□□ -2.23
SSSCA1O60232 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.1□□□□□ -2.23
SSSCA1O60232 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
SSSCA1O60232 AL356473.1-201ENST00000406203 1408 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 SNORD114-1-201ENST00000362705 72 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 MIR934-201ENST00000401241 83 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AP000949.1-201ENST00000438328 629 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 BNIP3P2-201ENST00000441221 577 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SSSCA1O60232 AC007677.1-201ENST00000445757 515 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 HSPE1P24-201ENST00000450782 238 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC104073.1-201ENST00000451988 151 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 RPS20P24-201ENST00000457473 361 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.09□□□□□ -2.23
SSSCA1O60232 AC093801.2-201ENST00000503966 1050 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC025459.1-201ENST00000504072 156 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SSSCA1O60232 AL359273.1-201ENST00000510918 627 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC010486.1-201ENST00000511793 424 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.09□□□□□ -2.23
SSSCA1O60232 AC025857.1-201ENST00000525252 377 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.09□□□□□ -2.23
SSSCA1O60232 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.09□□□□□ -2.23
SSSCA1O60232 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.09□□□□□ -2.23
SSSCA1O60232 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.09□□□□□ -2.23
SSSCA1O60232 HMGN2P15-201ENST00000585707 270 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC008121.1-201ENST00000603244 268 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC079791.1-201ENST00000605356 973 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC097504.2-201ENST00000608088 454 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AL592148.2-201ENST00000612210 372 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC091304.6-201ENST00000619761 202 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 AC011330.2-201ENST00000621680 635 ntBASIC1.09□□□□□ -2.23
SSSCA1O60232 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
SSSCA1O60232 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
SSSCA1O60232 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SSSCA1O60232 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SSSCA1O60232 U8.13-201ENST00000390842 128 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SSSCA1O60232 AL035407.1-201ENST00000429211 571 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AL512844.2-201ENST00000433990 593 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms