Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 OR5BM1P-201ENST00000512021 366 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP1O15259 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP1O15259 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP1O15259 AC093012.1-202ENST00000549403 582 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 ZNF519P3-201ENST00000557158 1032 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 AC135628.1-201ENST00000568867 534 ntBASIC3.88□□□□□ -1.79
NPHP1O15259 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.88□□□□□ -1.79
NPHP1O15259 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.88□□□□□ -1.79
NPHP1O15259 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPHP1O15259 AC103988.1-201ENST00000566382 2177 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.87□□□□□ -1.79
NPHP1O15259 AL079305.1-201ENST00000623159 3008 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHP1O15259 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHP1O15259 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHP1O15259 FTLP6-201ENST00000355274 422 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 SNORA54-201ENST00000384281 123 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 RNU6-278P-201ENST00000390945 109 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 MTCYBP36-201ENST00000404146 440 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 TRIAP1P1-201ENST00000427062 225 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC007919.1-201ENST00000429380 217 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 RPS6P15-201ENST00000431996 751 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHP1O15259 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 PIGFP3-201ENST00000441918 722 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHP1O15259 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.87□□□□□ -1.79
NPHP1O15259 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 RPS4XP2-201ENST00000458402 793 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 SCGB1D5P-201ENST00000515134 247 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 RNA5SP367-201ENST00000516557 118 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 AC090888.1-201ENST00000561335 1141 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC005951.1-201ENST00000576706 485 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 MIR3146-201ENST00000580367 79 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.87□□□□□ -1.79
NPHP1O15259 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPHP1O15259 AL133393.1-201ENST00000603277 287 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC107294.1-201ENST00000609524 467 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC090970.3-201ENST00000612566 866 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AL603755.1-201ENST00000619504 163 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHP1O15259 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHP1O15259 AL136360.1-201ENST00000503377 1900 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 AC058791.1-201ENST00000608412 3198 ntBASIC3.87□□□□□ -1.79
NPHP1O15259 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.87□□□□□ -1.79
NPHP1O15259 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.87□□□□□ -1.79
NPHP1O15259 AC091564.4-201ENST00000533934 2194 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPHP1O15259 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NPHP1O15259 RNA5SP126-201ENST00000365092 109 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 CD24P4-201ENST00000382840 243 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 RNU6-533P-201ENST00000384144 107 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AL049545.1-201ENST00000401856 572 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.86□□□□□ -1.79
NPHP1O15259 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPHP1O15259 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 AL139413.1-201ENST00000421309 217 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 snoU13.28-201ENST00000459235 104 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 MTCO2P6-201ENST00000463134 685 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 AC010486.2-201ENST00000505572 483 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 MIR2276-201ENST00000516886 89 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AC025881.1-201ENST00000518851 512 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AC022616.6-201ENST00000520479 119 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.86□□□□□ -1.79
NPHP1O15259 AL845331.3-202ENST00000562856 261 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHP1O15259 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 ELOCP29-201ENST00000588193 334 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 KC877982.1-201ENST00000602313 470 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AL022161.1-201ENST00000604390 213 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AL161729.4-201ENST00000604650 476 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 AC105129.3-201ENST00000605455 485 ntBASIC3.86□□□□□ -1.79
NPHP1O15259 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHP1O15259 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
NPHP1O15259 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHP1O15259 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHP1O15259 RNU6-1284P-201ENST00000363701 100 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 Y_RNA.169-201ENST00000363745 96 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 SNORD115.1-201ENST00000391109 76 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 RPL7P46-201ENST00000425129 740 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 AC244035.1-201ENST00000430042 390 ntBASIC3.85□□□□□ -1.79
NPHP1O15259 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHP1O15259 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms