Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 RNU6-188P-201ENST00000364207 107 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 RNU6-946P-201ENST00000383878 107 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 SNORD116-2-201ENST00000384274 95 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 SNORD116-6-201ENST00000384711 96 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
AP3D1O14617 ATP5A1P2-201ENST00000412323 255 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 RPS12P24-201ENST00000412619 387 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3D1O14617 AC017079.2-201ENST00000416102 485 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3D1O14617 RPS24P1-201ENST00000438550 371 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3D1O14617 Z83846.1-201ENST00000446798 265 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 RPL23AP67-201ENST00000465341 474 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 MRPS17P3-201ENST00000465453 385 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC007182.2-201ENST00000489251 402 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC114786.4-201ENST00000508771 728 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3D1O14617 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 HMGB1P41-201ENST00000520234 440 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.25□□□□□ -1.89
AP3D1O14617 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
AP3D1O14617 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3D1O14617 HMGN2P15-201ENST00000585707 270 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 NRBF2P1-201ENST00000587407 859 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC174048.1-201ENST00000603389 144 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC090578.1-201ENST00000604955 591 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC087752.4-201ENST00000605911 462 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 AC068880.5-201ENST00000624331 290 ntBASIC3.25□□□□□ -1.89
AP3D1O14617 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.25□□□□□ -1.89
AP3D1O14617 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
AP3D1O14617 OR5J1P-201ENST00000313544 939 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC073343.1-201ENST00000328239 651 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3D1O14617 SNORA20.2-201ENST00000383922 131 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 SNORD116-9-201ENST00000384000 95 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 SNORD116-3-201ENST00000384287 95 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 SNORD116-7-201ENST00000384404 95 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 SNORD116-5-201ENST00000384462 95 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 MIR558-201ENST00000384920 94 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 RNU2-68P-201ENST00000410878 191 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC127391.1-201ENST00000411737 98 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3D1O14617 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3D1O14617 AL451062.2-201ENST00000427515 271 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AP000907.1-201ENST00000428428 510 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3D1O14617 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3D1O14617 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3D1O14617 AL031667.1-201ENST00000440222 725 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3D1O14617 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
AP3D1O14617 AL136380.1-201ENST00000447970 162 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.24□□□□□ -1.89
AP3D1O14617 RPL31P3-201ENST00000458430 332 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 RAC1P5-201ENST00000512182 576 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 Vault.3-201ENST00000516676 95 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.24□□□□□ -1.89
AP3D1O14617 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3D1O14617 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3D1O14617 AC073544.2-201ENST00000601155 540 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC019176.2-201ENST00000611579 315 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 DUSP12P1-201ENST00000612874 516 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AL133173.2-201ENST00000614270 90 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AL357559.1-201ENST00000622228 274 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 AC099506.2-201ENST00000623074 221 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.24□□□□□ -1.89
AP3D1O14617 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
AP3D1O14617 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
AP3D1O14617 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.24□□□□□ -1.89
AP3D1O14617 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3D1O14617 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3D1O14617 ZNF285B-201ENST00000561698 1767 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
AP3D1O14617 FRG1CP-201ENST00000358464 769 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
AP3D1O14617 RNU6-778P-201ENST00000363269 103 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RNU6-288P-201ENST00000363690 104 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RNU6-169P-201ENST00000365336 107 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3D1O14617 HMGN2P30-201ENST00000423237 256 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3D1O14617 SKA2P1-201ENST00000425592 390 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 MED13P1-201ENST00000428342 171 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 AC073614.1-201ENST00000438690 650 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 MTND4P25-201ENST00000441039 533 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 USP9YP29-201ENST00000445112 563 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RPL26P9-201ENST00000457466 433 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3D1O14617 RPS29P12-201ENST00000460178 152 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RPL36AP51-201ENST00000487216 318 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3D1O14617 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.23□□□□□ -1.89
AP3D1O14617 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.23□□□□□ -1.89
AP3D1O14617 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.23□□□□□ -1.89
AP3D1O14617 SNORA18.6-201ENST00000516792 115 ntBASIC3.23□□□□□ -1.89
AP3D1O14617 RNU6-677P-201ENST00000516914 101 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms