Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CUX2O14529 HMGB3P15-201ENST00000507326 574 ntBASIC3.35□□□□□ -1.87
CUX2O14529 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CUX2O14529 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.35□□□□□ -1.87
CUX2O14529 AP002748.2-201ENST00000528671 348 ntBASIC3.35□□□□□ -1.87
CUX2O14529 AC008127.2-201ENST00000549925 1075 ntBASIC3.35□□□□□ -1.87
CUX2O14529 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.35□□□□□ -1.87
CUX2O14529 AC005014.3-201ENST00000605985 190 ntBASIC3.35□□□□□ -1.87
CUX2O14529 AC018645.2-201ENST00000609151 472 ntBASIC3.35□□□□□ -1.87
CUX2O14529 AC008083.4-201ENST00000615076 444 ntBASIC3.35□□□□□ -1.87
CUX2O14529 AC040168.1-201ENST00000623594 991 ntBASIC3.35□□□□□ -1.87
CUX2O14529 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.34□□□□□ -1.87
CUX2O14529 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CUX2O14529 ZNF271P-202ENST00000465539 1970 ntBASIC3.34□□□□□ -1.88
CUX2O14529 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CUX2O14529 SUGT1P1-201ENST00000379514 476 ntBASIC3.34□□□□□ -1.88
CUX2O14529 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.34□□□□□ -1.88
CUX2O14529 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.34□□□□□ -1.88
CUX2O14529 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.34□□□□□ -1.88
CUX2O14529 RPL23AP20-201ENST00000447965 421 ntBASIC3.34□□□□□ -1.88
CUX2O14529 snoU13.4-201ENST00000458916 104 ntBASIC3.34□□□□□ -1.88
CUX2O14529 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.34□□□□□ -1.88
CUX2O14529 AC118942.1-201ENST00000529674 1035 ntBASIC3.34□□□□□ -1.88
CUX2O14529 AC087481.2-201ENST00000565492 330 ntBASIC3.34□□□□□ -1.88
CUX2O14529 SNORD84-203ENST00000584275 78 ntBASIC3.34□□□□□ -1.88
CUX2O14529 MIR5002-201ENST00000584713 97 ntBASIC3.34□□□□□ -1.88
CUX2O14529 AC055876.5-201ENST00000605667 259 ntBASIC3.34□□□□□ -1.88
CUX2O14529 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.34□□□□□ -1.88
CUX2O14529 XIST_intron.1-201ENST00000619444 68 ntBASIC3.34□□□□□ -1.88
CUX2O14529 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.34□□□□□ -1.88
CUX2O14529 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CUX2O14529 NUP58P1-201ENST00000502546 1738 ntBASIC3.34□□□□□ -1.88
CUX2O14529 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
CUX2O14529 AP001486.2-201ENST00000561652 5113 ntBASIC3.33□□□□□ -1.88
CUX2O14529 RNA5SP181-201ENST00000410246 98 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AF274854.1-201ENST00000413236 615 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AC092634.6-201ENST00000418558 192 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.33□□□□□ -1.88
CUX2O14529 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.33□□□□□ -1.88
CUX2O14529 SDR42E1P3-201ENST00000438345 502 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.33□□□□□ -1.88
CUX2O14529 VN1R10P-201ENST00000447106 875 ntBASIC3.33□□□□□ -1.88
CUX2O14529 RPL7P5-201ENST00000471472 736 ntBASIC3.33□□□□□ -1.88
CUX2O14529 HMGB1P22-201ENST00000505315 124 ntBASIC3.33□□□□□ -1.88
CUX2O14529 RNU6-276P-201ENST00000516114 96 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AC104986.1-201ENST00000517978 436 ntBASIC3.33□□□□□ -1.88
CUX2O14529 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AP000889.2-201ENST00000532684 490 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.33□□□□□ -1.88
CUX2O14529 AP001029.3-201ENST00000588063 596 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AL606834.3-201ENST00000602615 496 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AC112220.2-201ENST00000605513 533 ntBASIC3.33□□□□□ -1.88
CUX2O14529 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.33□□□□□ -1.88
CUX2O14529 AP001148.1-201ENST00000624124 2359 ntBASIC3.32□□□□□ -1.88
CUX2O14529 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CUX2O14529 RNU2-15P-201ENST00000410692 191 ntBASIC3.32□□□□□ -1.88
CUX2O14529 RNU2-42P-201ENST00000410697 113 ntBASIC3.32□□□□□ -1.88
CUX2O14529 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.32□□□□□ -1.88
CUX2O14529 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.32□□□□□ -1.88
CUX2O14529 USP9YP22-201ENST00000438971 294 ntBASIC3.32□□□□□ -1.88
CUX2O14529 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.32□□□□□ -1.88
CUX2O14529 AC079776.3-201ENST00000450665 370 ntBASIC3.32□□□□□ -1.88
CUX2O14529 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.32□□□□□ -1.88
CUX2O14529 AC093752.1-206ENST00000511823 336 ntBASIC3.32□□□□□ -1.88
CUX2O14529 RNU1-61P-201ENST00000516107 151 ntBASIC3.32□□□□□ -1.88
CUX2O14529 SNORA19.3-201ENST00000516165 130 ntBASIC3.32□□□□□ -1.88
CUX2O14529 RNA5SP468-201ENST00000516782 93 ntBASIC3.32□□□□□ -1.88
CUX2O14529 RNU6-1261P-201ENST00000517194 104 ntBASIC3.32□□□□□ -1.88
CUX2O14529 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.32□□□□□ -1.88
CUX2O14529 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.32□□□□□ -1.88
CUX2O14529 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
CUX2O14529 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CUX2O14529 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.32□□□□□ -1.88
CUX2O14529 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.32□□□□□ -1.88
CUX2O14529 AC009237.15-201ENST00000610252 501 ntBASIC3.32□□□□□ -1.88
CUX2O14529 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CUX2O14529 MIR6895-201ENST00000613497 78 ntBASIC3.32□□□□□ -1.88
CUX2O14529 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CUX2O14529 Y_RNA.25-201ENST00000362528 102 ntBASIC3.31□□□□□ -1.88
CUX2O14529 Y_RNA.205-201ENST00000364128 113 ntBASIC3.31□□□□□ -1.88
CUX2O14529 RAC1P8-201ENST00000427086 527 ntBASIC3.31□□□□□ -1.88
CUX2O14529 AC012497.1-201ENST00000429392 575 ntBASIC3.31□□□□□ -1.88
CUX2O14529 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.31□□□□□ -1.88
CUX2O14529 MTND4LP10-201ENST00000435146 291 ntBASIC3.31□□□□□ -1.88
CUX2O14529 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.31□□□□□ -1.88
CUX2O14529 AC104982.1-201ENST00000478775 574 ntBASIC3.31□□□□□ -1.88
CUX2O14529 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.31□□□□□ -1.88
CUX2O14529 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.31□□□□□ -1.88
CUX2O14529 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.31□□□□□ -1.88
CUX2O14529 AL022067.1-201ENST00000602426 454 ntBASIC3.31□□□□□ -1.88
CUX2O14529 AC091946.2-201ENST00000606105 291 ntBASIC3.31□□□□□ -1.88
CUX2O14529 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.31□□□□□ -1.88
CUX2O14529 AC091925.2-201ENST00000625059 256 ntBASIC3.31□□□□□ -1.88
CUX2O14529 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CUX2O14529 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CUX2O14529 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CUX2O14529 RPL23AP47-201ENST00000408017 460 ntBASIC3.3□□□□□ -1.88
CUX2O14529 RNU6-712P-201ENST00000410558 100 ntBASIC3.3□□□□□ -1.88
CUX2O14529 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.3□□□□□ -1.88
CUX2O14529 C1DP1-201ENST00000426049 402 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms