Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 RSL24D1P2-201ENST00000445584 366 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.1□□□□□ -2.23
CACNA1AO00555 RNA5SP233-201ENST00000459153 113 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AC078918.1-201ENST00000498515 228 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC1.1□□□□□ -2.23
CACNA1AO00555 AC093510.2-201ENST00000562820 896 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.1□□□□□ -2.23
CACNA1AO00555 ZNF37BP-203ENST00000452306 1352 ntBASIC1.1□□□□□ -2.23
CACNA1AO00555 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CACNA1AO00555 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CACNA1AO00555 AC008850.1-201ENST00000427546 362 ntBASIC1.09□□□□□ -2.23
CACNA1AO00555 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.09□□□□□ -2.23
CACNA1AO00555 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.09□□□□□ -2.23
CACNA1AO00555 AC118942.1-201ENST00000529674 1035 ntBASIC1.09□□□□□ -2.23
CACNA1AO00555 AP000811.1-201ENST00000603803 651 ntBASIC1.09□□□□□ -2.23
CACNA1AO00555 AC135178.6-201ENST00000605314 398 ntBASIC1.09□□□□□ -2.23
CACNA1AO00555 AC006338.1-201ENST00000618453 749 ntBASIC1.09□□□□□ -2.23
CACNA1AO00555 AC073055.1-201ENST00000456901 1621 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CACNA1AO00555 VTRNA1-1-201ENST00000363120 99 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 SNORD95.1-201ENST00000364099 68 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 MIR532-201ENST00000385025 91 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 SNRPFP2-201ENST00000440710 251 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 RPL17P49-201ENST00000443728 411 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 MTND4LP22-201ENST00000508209 276 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.09□□□□□ -2.24
CACNA1AO00555 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1AO00555 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1AO00555 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1AO00555 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.09□□□□□ -2.24
CACNA1AO00555 AC012531.5-201ENST00000611375 151 ntBASIC1.09□□□□□ -2.24
CACNA1AO00555 AL359851.1-201ENST00000569460 4997 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 ELL2P3-201ENST00000457883 1602 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 MTND4P13-201ENST00000402078 1023 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 AL357078.2-201ENST00000416486 427 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 AC096632.1-201ENST00000427395 310 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 PTENP1-201ENST00000447117 1215 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.08□□□□□ -2.24
CACNA1AO00555 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 AL121594.5-201ENST00000631724 573 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CACNA1AO00555 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.08□□□□□ -2.24
CACNA1AO00555 AC097499.1-201ENST00000444277 208 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 RNA5SP310-201ENST00000459084 116 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.08□□□□□ -2.24
CACNA1AO00555 AL049838.1-201ENST00000563647 981 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.08□□□□□ -2.24
CACNA1AO00555 DUXAP9-208ENST00000622815 614 ntBASIC1.08□□□□□ -2.24
CACNA1AO00555 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CACNA1AO00555 Y_RNA.204-201ENST00000364112 102 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 RNU11-5P-201ENST00000391216 129 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 VPS26BP1-201ENST00000417155 755 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
CACNA1AO00555 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1AO00555 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.07□□□□□ -2.24
CACNA1AO00555 AC068831.7-201ENST00000616954 363 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CACNA1AO00555 SNORD57-201ENST00000448188 72 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.07□□□□□ -2.24
CACNA1AO00555 SEM1P1-201ENST00000506694 209 ntBASIC1.07□□□□□ -2.24
CACNA1AO00555 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1AO00555 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CACNA1AO00555 AC007098.1-201ENST00000420122 367 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.06□□□□□ -2.24
CACNA1AO00555 SNORA31.16-201ENST00000516773 139 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 AC010620.1-201ENST00000601088 1102 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 DPRXP5-201ENST00000604662 539 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.06□□□□□ -2.24
CACNA1AO00555 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CACNA1AO00555 DPPA2P1-201ENST00000428060 556 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 AC012497.1-201ENST00000429392 575 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.06□□□□□ -2.24
CACNA1AO00555 AC087465.1-201ENST00000560574 245 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 DUXAP3-201ENST00000603616 594 ntBASIC1.06□□□□□ -2.24
CACNA1AO00555 NACAP2-201ENST00000318548 624 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 Y_RNA.552-201ENST00000384665 112 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 RNA5SP193-201ENST00000410353 107 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 XIST-201ENST00000416330 750 ntTSL 2 BASIC1.05□□□□□ -2.24
CACNA1AO00555 SNRPGP13-201ENST00000442212 177 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 RPS20P10-201ENST00000451209 253 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 AC023424.2-201ENST00000493479 777 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.05□□□□□ -2.24
CACNA1AO00555 PRELID2P1-201ENST00000552837 301 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.05□□□□□ -2.24
CACNA1AO00555 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.05□□□□□ -2.24
CACNA1AO00555 SNORD118-201ENST00000363593 134 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 RPL31P58-201ENST00000469001 379 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 AC087190.1-201ENST00000484462 480 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.05□□□□□ -2.24
CACNA1AO00555 PRELID3BP4-201ENST00000515476 571 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 Y_RNA.684-201ENST00000516510 99 ntBASIC1.05□□□□□ -2.24
CACNA1AO00555 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
CACNA1AO00555 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
CACNA1AO00555 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
CACNA1AO00555 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CACNA1AO00555 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.04□□□□□ -2.24
CACNA1AO00555 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 AC109583.1-201ENST00000432156 268 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 AC096571.1-202ENST00000506634 735 ntBASIC1.04□□□□□ -2.24
CACNA1AO00555 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms