Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RTCAO00442 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.05□□□□□ -1.92
RTCAO00442 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.04□□□□□ -1.92
RTCAO00442 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RTCAO00442 SNORA68.1-201ENST00000364537 132 ntBASIC3.04□□□□□ -1.92
RTCAO00442 RNA5SP267-201ENST00000364893 126 ntBASIC3.04□□□□□ -1.92
RTCAO00442 SNORD116-2-201ENST00000384274 95 ntBASIC3.04□□□□□ -1.92
RTCAO00442 SNORD116-6-201ENST00000384711 96 ntBASIC3.04□□□□□ -1.92
RTCAO00442 MT-TH-201ENST00000387441 69 ntBASIC3.04□□□□□ -1.92
RTCAO00442 MIR888-201ENST00000401186 77 ntBASIC3.04□□□□□ -1.92
RTCAO00442 RPL7P25-201ENST00000404151 721 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AL021407.1-201ENST00000404531 386 ntBASIC3.04□□□□□ -1.92
RTCAO00442 TXNP7-201ENST00000406296 293 ntBASIC3.04□□□□□ -1.92
RTCAO00442 CCNG1P1-201ENST00000406783 885 ntBASIC3.04□□□□□ -1.92
RTCAO00442 RN7SKP140-201ENST00000411196 284 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.04□□□□□ -1.92
RTCAO00442 CYCSP46-201ENST00000423569 204 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 AC009969.1-201ENST00000438726 172 ntBASIC3.04□□□□□ -1.92
RTCAO00442 RPL21P2-201ENST00000440049 481 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 RPL7P49-201ENST00000471402 708 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AP000797.1-201ENST00000478870 387 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 AC105313.1-201ENST00000509121 353 ntBASIC3.04□□□□□ -1.92
RTCAO00442 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 AC074250.1-201ENST00000511117 192 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC022634.1-201ENST00000520765 532 ntBASIC3.04□□□□□ -1.92
RTCAO00442 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.04□□□□□ -1.92
RTCAO00442 AL391261.3-201ENST00000557194 520 ntBASIC3.04□□□□□ -1.92
RTCAO00442 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
RTCAO00442 AC060771.1-201ENST00000582031 164 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.04□□□□□ -1.92
RTCAO00442 AC012065.4-201ENST00000602445 679 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AL606834.2-201ENST00000602954 668 ntBASIC3.04□□□□□ -1.92
RTCAO00442 NRBF2P5-201ENST00000603087 788 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AL031775.1-201ENST00000607014 887 ntBASIC3.04□□□□□ -1.92
RTCAO00442 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.04□□□□□ -1.92
RTCAO00442 AC138749.5-201ENST00000611461 208 ntBASIC3.04□□□□□ -1.92
RTCAO00442 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RTCAO00442 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.04□□□□□ -1.92
RTCAO00442 AC116165.2-201ENST00000616705 206 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC092140.2-201ENST00000618027 521 ntBASIC3.04□□□□□ -1.92
RTCAO00442 AC093591.3-201ENST00000634516 308 ntBASIC3.04□□□□□ -1.92
RTCAO00442 CU459211.1-201ENST00000635667 749 ntBASIC3.04□□□□□ -1.92
RTCAO00442 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RTCAO00442 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.04□□□□□ -1.92
RTCAO00442 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RTCAO00442 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.03□□□□□ -1.92
RTCAO00442 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.03□□□□□ -1.92
RTCAO00442 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.03□□□□□ -1.92
RTCAO00442 Y_RNA.46-201ENST00000362695 102 ntBASIC3.03□□□□□ -1.92
RTCAO00442 SNORA26.8-201ENST00000391306 124 ntBASIC3.03□□□□□ -1.92
RTCAO00442 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
RTCAO00442 RPL19P1-201ENST00000411635 428 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.03□□□□□ -1.92
RTCAO00442 AL353777.1-201ENST00000425552 326 ntBASIC3.03□□□□□ -1.92
RTCAO00442 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.03□□□□□ -1.92
RTCAO00442 COX6CP2-201ENST00000444980 225 ntBASIC3.03□□□□□ -1.92
RTCAO00442 DDX3P2-201ENST00000446138 111 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AL162389.1-201ENST00000449233 177 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC112204.1-201ENST00000502591 103 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC093534.1-201ENST00000504977 132 ntBASIC3.03□□□□□ -1.92
RTCAO00442 FABP5P5-201ENST00000515537 406 ntBASIC3.03□□□□□ -1.92
RTCAO00442 GLYCAM1-201ENST00000546596 285 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.03□□□□□ -1.92
RTCAO00442 MIR3616-201ENST00000584070 92 ntBASIC3.03□□□□□ -1.92
RTCAO00442 PIGPP4-201ENST00000584447 307 ntBASIC3.03□□□□□ -1.92
RTCAO00442 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.03□□□□□ -1.92
RTCAO00442 AC002545.1-201ENST00000592511 181 ntBASIC3.03□□□□□ -1.92
RTCAO00442 FTX_3.1-201ENST00000610451 147 ntBASIC3.03□□□□□ -1.92
RTCAO00442 MIR7112-201ENST00000616126 65 ntBASIC3.03□□□□□ -1.92
RTCAO00442 AC084757.4-201ENST00000616350 526 ntBASIC3.03□□□□□ -1.92
RTCAO00442 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.03□□□□□ -1.92
RTCAO00442 AC073476.4-201ENST00000628409 72 ntBASIC3.03□□□□□ -1.92
RTCAO00442 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.03□□□□□ -1.92
RTCAO00442 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RTCAO00442 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 AC092125.1-201ENST00000562568 1995 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC135776.4-201ENST00000624300 1904 ntBASIC3.02□□□□□ -1.93
RTCAO00442 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RTCAO00442 Y_RNA.77-201ENST00000362962 107 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SNORD116-9-201ENST00000384000 95 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SNORD116-3-201ENST00000384287 95 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SNORD116-7-201ENST00000384404 95 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SNORD116-5-201ENST00000384462 95 ntBASIC3.02□□□□□ -1.93
RTCAO00442 RNU6-140P-201ENST00000384566 108 ntBASIC3.02□□□□□ -1.93
RTCAO00442 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC245291.1-201ENST00000419501 328 ntBASIC3.02□□□□□ -1.93
RTCAO00442 SDCBPP3-201ENST00000419629 891 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AL451054.2-201ENST00000420896 202 ntBASIC3.02□□□□□ -1.93
RTCAO00442 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.02□□□□□ -1.93
RTCAO00442 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.02□□□□□ -1.93
RTCAO00442 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.02□□□□□ -1.93
RTCAO00442 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
RTCAO00442 AC118469.1-201ENST00000442943 488 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms