Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.56□□□□□ -1.84
EIF3FO00303 AC006130.2-201ENST00000586202 326 ntBASIC3.56□□□□□ -1.84
EIF3FO00303 AC064807.4-201ENST00000607201 407 ntBASIC3.56□□□□□ -1.84
EIF3FO00303 AC138649.3-201ENST00000622154 254 ntBASIC3.56□□□□□ -1.84
EIF3FO00303 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
EIF3FO00303 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
EIF3FO00303 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.56□□□□□ -1.84
EIF3FO00303 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
EIF3FO00303 GABRG2-229ENST00000641017 3628 ntBASIC3.56□□□□□ -1.84
EIF3FO00303 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
EIF3FO00303 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
EIF3FO00303 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
EIF3FO00303 Y_RNA.194-201ENST00000363985 102 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 RNU6-190P-201ENST00000384154 102 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 RNU6-198P-201ENST00000384258 104 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 SNORA11-201ENST00000408789 128 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 ATP5A1P2-201ENST00000412323 255 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.55□□□□□ -1.84
EIF3FO00303 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.55□□□□□ -1.84
EIF3FO00303 AC099548.1-201ENST00000421443 426 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AC069157.1-201ENST00000421749 137 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.55□□□□□ -1.84
EIF3FO00303 AC002075.2-201ENST00000425207 252 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 GPM6BP2-201ENST00000432046 144 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 GOT2P5-201ENST00000433995 546 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 GPM6BP1-201ENST00000446387 144 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.55□□□□□ -1.84
EIF3FO00303 RPS3AP46-201ENST00000448352 682 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AC079448.1-201ENST00000449377 373 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.55□□□□□ -1.84
EIF3FO00303 FABP5P15-201ENST00000453566 214 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 SNORD105B-201ENST00000458770 79 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 snoU13.28-201ENST00000459235 104 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 RNU2-27P-201ENST00000516185 142 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.55□□□□□ -1.84
EIF3FO00303 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
EIF3FO00303 AC087683.1-201ENST00000591187 441 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 AL136363.1-201ENST00000605349 337 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.55□□□□□ -1.84
EIF3FO00303 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.55□□□□□ -1.84
EIF3FO00303 AC006504.1-201ENST00000562493 3666 ntBASIC3.55□□□□□ -1.84
EIF3FO00303 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
EIF3FO00303 API5P2-201ENST00000397055 1498 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.54□□□□□ -1.84
EIF3FO00303 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EIF3FO00303 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
EIF3FO00303 Y_RNA.22-201ENST00000362492 102 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RNU6-623P-201ENST00000363143 105 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
EIF3FO00303 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.54□□□□□ -1.84
EIF3FO00303 RNU6-641P-201ENST00000384006 107 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 U8.11-201ENST00000384699 133 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 U8.12-201ENST00000384701 133 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AL354719.1-201ENST00000406535 843 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RN7SKP202-201ENST00000410439 330 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RPS12P24-201ENST00000412619 387 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 MORF4L1P6-201ENST00000418771 268 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AC016907.1-201ENST00000419483 435 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AC093106.2-201ENST00000428212 385 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RPL21P40-201ENST00000428586 483 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 OR2B8P-201ENST00000432841 938 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RPS20P5-201ENST00000434808 360 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 SNRPEP9-201ENST00000436794 238 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 NOTCH2P1-201ENST00000443481 624 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 MTCO2P7-201ENST00000446518 666 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AL031183.1-201ENST00000457667 207 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 U8.18-201ENST00000459285 133 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.54□□□□□ -1.84
EIF3FO00303 RNU6-405P-201ENST00000516637 110 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RNU6-143P-201ENST00000516942 93 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 RNU6-1220P-201ENST00000517126 108 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.54□□□□□ -1.84
EIF3FO00303 DUXAP2-201ENST00000519198 589 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AC007991.1-201ENST00000522680 631 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.54□□□□□ -1.84
EIF3FO00303 AC098848.2-201ENST00000588023 330 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 BNIP3P9-201ENST00000603714 553 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 AC006077.1-201ENST00000604746 343 ntBASIC3.54□□□□□ -1.84
EIF3FO00303 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
EIF3FO00303 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
EIF3FO00303 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
EIF3FO00303 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.53□□□□□ -1.84
EIF3FO00303 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.53□□□□□ -1.84
EIF3FO00303 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
EIF3FO00303 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
EIF3FO00303 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
EIF3FO00303 RNU6-512P-201ENST00000364438 103 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
EIF3FO00303 RNU5A-6P-201ENST00000384136 116 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 Y_RNA.559-201ENST00000384686 107 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 Y_RNA.582-201ENST00000391023 95 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 SAR1AP2-201ENST00000392696 594 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.53□□□□□ -1.84
EIF3FO00303 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms