Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNRPGP6-201ENST00000451124 220 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.75□□□□□ -1.97
PDLIM1O00151 RPS29P2-201ENST00000479278 136 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 DSTNP2-201ENST00000504533 515 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 RNU6-1129P-201ENST00000515964 104 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 CASP1P1-201ENST00000526345 212 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC128657.1-201ENST00000549459 145 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC008015.1-201ENST00000555505 465 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 MIR3200-201ENST00000580767 85 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC068790.3-201ENST00000602988 553 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC068313.1-201ENST00000604028 1008 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 HSPE1P7-201ENST00000604681 321 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC093838.1-201ENST00000613014 469 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 TUG1_2.1-201ENST00000614234 87 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC010338.1-201ENST00000621823 717 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AL356266.1-201ENST00000623311 483 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AC027309.3-201ENST00000623419 351 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC099654.7-201ENST00000635788 2127 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM1O00151 AC093536.2-201ENST00000565257 1406 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PDLIM1O00151 SDAD1P2-201ENST00000441308 2028 ntBASIC2.75□□□□□ -1.97
PDLIM1O00151 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PDLIM1O00151 SNORD21-201ENST00000383953 95 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 SNORA54-201ENST00000384281 123 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 U8.14-201ENST00000390843 143 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 VPS26BP1-201ENST00000417155 755 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 MTND4P20-201ENST00000424125 869 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 RPL23AP83-201ENST00000434984 473 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 RNU7-125P-201ENST00000458760 62 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 RPS20P20-201ENST00000460498 340 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 SETP11-201ENST00000473027 690 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AC026427.2-201ENST00000506228 536 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 RNU6-390P-201ENST00000516259 103 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 SCARNA15.2-201ENST00000516409 127 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 RNU6-1256P-201ENST00000516539 103 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AC087373.1-201ENST00000524920 491 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AP000907.2-201ENST00000530827 353 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM1O00151 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.74□□□□□ -1.97
PDLIM1O00151 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM1O00151 MIR4307-201ENST00000582802 84 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 MIR4325-201ENST00000583049 90 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM1O00151 MTCYBP22-201ENST00000603788 447 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AC018638.7-201ENST00000605836 1114 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM1O00151 AC007038.2-201ENST00000608095 740 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AC004908.2-201ENST00000609090 574 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 AL161629.2-201ENST00000615347 275 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
PDLIM1O00151 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 AL035425.3-201ENST00000564206 4996 ntBASIC2.74□□□□□ -1.97
PDLIM1O00151 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
PDLIM1O00151 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.73□□□□□ -1.97
PDLIM1O00151 RNU6-278P-201ENST00000390945 109 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 RNA5SP181-201ENST00000410246 98 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM1O00151 AC080125.1-201ENST00000414888 684 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM1O00151 NDUFB4P7-201ENST00000423198 363 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.73□□□□□ -1.97
PDLIM1O00151 RPL37P21-201ENST00000435890 276 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM1O00151 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.73□□□□□ -1.97
PDLIM1O00151 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 MTCO1P42-201ENST00000457379 726 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC068587.2-201ENST00000478386 781 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 RPL30P5-201ENST00000494923 336 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PDLIM1O00151 RPS27P27-201ENST00000498779 255 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC107222.1-201ENST00000510899 637 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 SNORA74D-201ENST00000516404 141 ntBASIC2.73□□□□□ -1.97
PDLIM1O00151 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.73□□□□□ -1.97
PDLIM1O00151 PSMA2P1-201ENST00000526365 646 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms