Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AC129850.1-201ENST00000436203 508 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 UBE2D3P4-201ENST00000441973 436 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 RPS3AP12-201ENST00000443616 753 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AC020550.1-201ENST00000447385 163 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 PDSS1P2-201ENST00000449397 678 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 USP9YP12-201ENST00000450481 570 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 RPS29P12-201ENST00000460178 152 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 RPL21P10-201ENST00000463521 490 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC008155.2-201ENST00000464337 397 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC188H7C350 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 RNU6-201P-201ENST00000517100 61 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC106038.2-201ENST00000520706 568 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC188H7C350 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC188H7C350 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AC007179.3-201ENST00000604976 235 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC188H7C350 AC012360.2-201ENST00000609349 391 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC108747.1-201ENST00000609508 535 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC004852.3-201ENST00000614131 326 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC097520.1-201ENST00000624435 385 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 AC103988.1-201ENST00000566382 2177 ntBASIC3.09□□□□□ -1.91
CCDC188H7C350 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC188H7C350 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.92
CCDC188H7C350 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC188H7C350 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC188H7C350 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC188H7C350 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC188H7C350 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC188H7C350 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC188H7C350 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC188H7C350 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC188H7C350 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC188H7C350 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC188H7C350 RNU5E-5P-201ENST00000365379 116 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 MIR767-201ENST00000390228 109 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 NDUFS5P1-201ENST00000405668 289 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 Z99497.1-201ENST00000421282 135 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AC099548.1-201ENST00000421443 426 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC188H7C350 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC188H7C350 HMGN2P31-201ENST00000432430 273 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AC119618.1-201ENST00000434191 222 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC188H7C350 EPS15P1-201ENST00000448836 336 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC188H7C350 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC188H7C350 AC138853.1-201ENST00000503549 823 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC188H7C350 SNORA31.21-201ENST00000517180 77 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC188H7C350 AC100870.1-201ENST00000522035 505 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AC007536.1-201ENST00000533382 349 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC188H7C350 NCAPGP2-201ENST00000557911 754 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AMZ2P1-203ENST00000565833 850 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AC109446.2-201ENST00000567872 497 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 MTCO3P13-201ENST00000577757 781 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 MIR5697-201ENST00000578045 78 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC188H7C350 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.08□□□□□ -1.92
CCDC188H7C350 WISP1-OT1-201ENST00000602893 642 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AL161729.4-201ENST00000604650 476 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 FRG1KP-201ENST00000623592 341 ntBASIC3.08□□□□□ -1.92
CCDC188H7C350 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC188H7C350 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC188H7C350 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC188H7C350 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC188H7C350 RNU6-1284P-201ENST00000363701 100 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 Y_RNA.245-201ENST00000364493 95 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AL049545.1-201ENST00000401856 572 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.07□□□□□ -1.92
CCDC188H7C350 MTATP6P17-201ENST00000431030 672 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC188H7C350 BNIP3P2-201ENST00000441221 577 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC098826.2-201ENST00000452011 651 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CCDC188H7C350 RPS3AP43-201ENST00000479743 781 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 RAC1P5-201ENST00000512182 576 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 SCARNA13-201ENST00000516672 275 ntBASIC3.07□□□□□ -1.92
CCDC188H7C350 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC188H7C350 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms