Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ATP5C1P1-201ENST00000441945 895 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC020550.1-201ENST00000447385 163 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RNU6-420P-201ENST00000458780 107 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RPS27P29-201ENST00000463110 252 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC006445.1-201ENST00000491925 405 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC100870.1-201ENST00000522035 505 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AP000867.2-201ENST00000532468 320 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC079089.3-201ENST00000603094 673 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AL590229.1-201ENST00000603497 542 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC068276.1-201ENST00000605793 379 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RMST_8.1-201ENST00000610287 165 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC073114.1-201ENST00000612027 490 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 uc_338.12-201ENST00000616344 181 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AC092140.2-201ENST00000618027 521 ntBASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
NPIPA3F8WFD2 AL049641.1-201ENST00000441055 1948 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 MTND5P27-201ENST00000428871 1720 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 RNY3P10-201ENST00000384764 102 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 MRPL42P2-201ENST00000403169 426 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 Z85995.1-201ENST00000415547 335 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC006366.1-201ENST00000422002 759 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC012498.1-201ENST00000424037 437 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC019097.1-201ENST00000424783 735 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC010099.1-201ENST00000455434 375 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 snoU13.28-201ENST00000459235 104 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 RPL27AP5-201ENST00000469428 449 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 RPS26P21-201ENST00000475397 348 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 MTND1P3-201ENST00000484956 952 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 MTND5P13-201ENST00000513046 1079 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 Y_RNA.688-201ENST00000516565 95 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 RNU6-1282P-201ENST00000516735 96 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 SNORD59.2-201ENST00000516873 68 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 RNA5SP291-201ENST00000517222 105 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AP003122.4-201ENST00000530980 758 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC012414.6-201ENST00000568241 401 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 HMGN1P30-201ENST00000589286 268 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL451007.1-201ENST00000595491 289 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 BNIP3P8-201ENST00000597863 560 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 AL138880.2-201ENST00000616214 239 ntBASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
NPIPA3F8WFD2 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
NPIPA3F8WFD2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
NPIPA3F8WFD2 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 RNU6-1284P-201ENST00000363701 100 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 RNU6-741P-201ENST00000383889 107 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 UBA52P6-201ENST00000399822 382 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 TAF9P1-201ENST00000445421 515 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC016696.1-201ENST00000446949 318 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 TAF9P2-201ENST00000454958 515 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 RPL21P8-201ENST00000465083 535 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC068724.1-201ENST00000487100 792 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC091965.2-201ENST00000512324 613 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 RPL21P5-201ENST00000554662 472 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 AC009977.1-201ENST00000586015 570 ntBASIC2.9□□□□□ -1.95
NPIPA3F8WFD2 Z94722.1-201ENST00000604328 474 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms