Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 AC005618.1-201ENST00000606901 3148 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
RNF223E7ERA6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RNF223E7ERA6 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 DEFB108F-201ENST00000344638 222 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 MIR367-201ENST00000362299 68 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RNA5SP46-201ENST00000362370 120 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RNU6-942P-201ENST00000363002 107 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 SNORA58B-201ENST00000364259 136 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RNU6-454P-201ENST00000364292 107 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RNU105B-201ENST00000364478 208 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RNU6-573P-201ENST00000383938 106 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AL031003.1-201ENST00000404229 172 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 U6atac.2-201ENST00000408644 118 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 RN7SKP61-201ENST00000410642 295 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 EDDM3CP-201ENST00000415977 425 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AC004386.2-201ENST00000441858 148 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5□□□□□ -1.61
RNF223E7ERA6 snoMBII-202.2-201ENST00000517263 86 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AC021231.3-201ENST00000558497 370 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5□□□□□ -1.61
RNF223E7ERA6 AC044860.2-201ENST00000561005 179 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AC233702.7-202ENST00000582941 211 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AC024255.1-201ENST00000614376 102 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
RNF223E7ERA6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 MAPK10-287ENST00000641217 3037 ntBASIC5□□□□□ -1.61
RNF223E7ERA6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5□□□□□ -1.61
RNF223E7ERA6 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNF223E7ERA6 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5□□□□□ -1.61
RNF223E7ERA6 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 AP001541.1-201ENST00000623322 1904 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 PHKBP1-201ENST00000450951 1951 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 SELENOWP1-201ENST00000322792 252 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU6-1141P-201ENST00000364520 107 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU6-1264P-201ENST00000383891 107 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU6-144P-201ENST00000383951 107 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 MIRLET7F2-201ENST00000385277 83 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RPS3AP1-201ENST00000413190 320 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC007919.1-201ENST00000429380 217 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 HMGN2P32-201ENST00000444648 269 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC109327.2-201ENST00000448339 378 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU7-141P-201ENST00000459304 62 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC007215.1-201ENST00000464893 276 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 BX510359.5-201ENST00000515651 304 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RN7SKP19-201ENST00000516016 252 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU6-781P-201ENST00000516377 101 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU6-1256P-201ENST00000516539 103 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AP006245.2-201ENST00000522004 300 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC022790.1-201ENST00000522872 204 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 MIR4301-201ENST00000577203 66 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 MIR1269B-201ENST00000580405 75 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 MIR378D2-201ENST00000580636 98 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 RNU4ATAC-201ENST00000580972 127 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 MIR6798-201ENST00000612887 67 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC074140.1-201ENST00000621617 208 ntBASIC4.99□□□□□ -1.61
RNF223E7ERA6 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RNF223E7ERA6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.99□□□□□ -1.61
RNF223E7ERA6 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms