Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL031667.1-201ENST00000440222 725 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL022238.1-201ENST00000442557 355 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 MTND2P19-201ENST00000449129 1012 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 USP9YP10-201ENST00000454868 628 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPL21P39-201ENST00000463605 483 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPL21P93-201ENST00000480465 489 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC233702.1-201ENST00000482905 502 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC109486.1-201ENST00000486833 374 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC093591.1-201ENST00000491435 481 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPL21P16-201ENST00000495531 483 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RPF2P2-201ENST00000504693 896 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC004062.1-201ENST00000509926 645 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AF131216.2-201ENST00000512316 564 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC022447.1-201ENST00000515358 464 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC002400.1-201ENST00000569310 726 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 LARP7P3-201ENST00000579888 337 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 TPMTP1-201ENST00000592307 737 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 DUXAP4-201ENST00000603046 613 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL137843.1-201ENST00000605078 385 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC080013.6-201ENST00000606185 215 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC006386.2-201ENST00000624491 75 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 AC012005.1-201ENST00000624575 75 ntBASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM49D1C9J1S8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 U3.4-201ENST00000363352 213 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-853P-201ENST00000364306 107 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RNU4-75P-201ENST00000364621 146 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-1207P-201ENST00000384343 107 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 MIR135A2-201ENST00000384854 100 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-821P-201ENST00000390995 107 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 HMGB1P11-201ENST00000413899 637 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 MTCO3P12-201ENST00000416718 547 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 CYCSP46-201ENST00000423569 204 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AL035407.1-201ENST00000429211 571 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 Z83846.1-201ENST00000446798 265 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AP001486.1-201ENST00000463339 476 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RPL30P6-201ENST00000475925 342 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AL049873.1-201ENST00000480540 376 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-714P-201ENST00000516963 103 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 MTCO1P47-201ENST00000523889 1271 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AP003497.1-201ENST00000528472 562 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 OR5BN1P-201ENST00000532955 829 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 EEF1B2P4-201ENST00000551398 348 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AL033523.1-201ENST00000605153 153 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC090186.1-201ENST00000605991 572 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC097065.2-201ENST00000608159 533 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AC073114.1-201ENST00000612027 490 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 AL137790.1-201ENST00000634283 177 ntBASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
TRIM49D1C9J1S8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 RNU6-28P-201ENST00000362378 107 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 SNORA80A-201ENST00000363922 136 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 Y_RNA.318-201ENST00000365131 97 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 SNORD51-201ENST00000384320 80 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 RNA5SP492-201ENST00000411330 114 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 RPL19P1-201ENST00000411635 428 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 MTATP6P27-201ENST00000416987 621 ntBASIC2.5□□□□□ -2.01
TRIM49D1C9J1S8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms