Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 RNU1-112P-201ENST00000364401 164 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 RNU6-224P-201ENST00000384055 107 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 RNU6-114P-201ENST00000384704 105 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 SNORA40.2-201ENST00000390847 128 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AL590084.1-201ENST00000407885 387 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 RNU6-516P-201ENST00000411381 104 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 NDUFS5P4-201ENST00000412983 318 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 TIMM9P2-201ENST00000419324 266 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 MED14P1-201ENST00000430517 648 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 COX7BP2-201ENST00000437976 242 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 MTND5P14-201ENST00000441481 1267 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 IFNA11P-201ENST00000446352 526 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AL139109.1-201ENST00000455491 297 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC104563.1-201ENST00000476147 376 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AL160314.1-201ENST00000490836 438 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC098799.1-201ENST00000504752 800 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 BTF3P12-201ENST00000519620 469 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 HMGN1P28-201ENST00000521340 364 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 CYCSP39-201ENST00000565821 309 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC009127.3-201ENST00000570531 403 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 OR4K7P-201ENST00000580232 945 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC007349.4-201ENST00000608114 532 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 TUG1_2.1-201ENST00000614234 87 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 SDR42E1P2-201ENST00000614861 481 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC231657.1-201ENST00000624313 397 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC004520.1-201ENST00000608362 1413 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC092447.10-201ENST00000620607 1652 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AC110491.1-201ENST00000562191 2010 ntBASIC1.9□□□□□ -2.11
RBFOX3A6NFN3 AL390862.1-201ENST00000635467 1469 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 RNU6-223P-201ENST00000362830 107 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 SNORA38-201ENST00000363946 132 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 TXNP7-201ENST00000406296 293 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 HMGB3P2-201ENST00000411913 584 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 RPL35AP22-201ENST00000436855 335 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 RPS24P13-201ENST00000442520 397 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 GZMAP1-201ENST00000503054 631 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC023141.11-201ENST00000508864 202 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 RNY4P37-201ENST00000516225 96 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 DEFB131D-201ENST00000526803 184 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC243972.3-201ENST00000539655 198 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AL132657.2-201ENST00000564417 358 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC061975.8-201ENST00000587058 721 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 RPS15AP11-201ENST00000594193 385 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AP000403.1-201ENST00000603349 851 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC004987.4-201ENST00000603383 338 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AL158211.2-201ENST00000607282 395 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC107308.1-201ENST00000615897 301 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 MIR7157-201ENST00000635801 60 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 AC010889.1-201ENST00000566193 2666 ntBASIC1.89□□□□□ -2.11
RBFOX3A6NFN3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AL356057.3-201ENST00000402607 340 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AL356421.1-201ENST00000403255 413 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 RNU4-72P-201ENST00000410754 173 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AC087499.2-201ENST00000432861 149 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 SNRPEP9-201ENST00000436794 238 ntBASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.88□□□□□ -2.11
RBFOX3A6NFN3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms