Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 MRPS17P3-201ENST00000465453 385 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SL132P-201ENST00000478131 296 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC106872.2-201ENST00000494303 480 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 PRDX4P1-201ENST00000507189 574 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 MTND1P35-201ENST00000526739 508 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AP004242.1-201ENST00000533701 349 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 MIR4775-201ENST00000581168 75 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 BDH2P1-201ENST00000602288 736 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL121772.2-201ENST00000614331 297 ntBASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.51□□□□□ -1.85
TCRBV7S3A2A0A539 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RIOK3P1-201ENST00000418778 1528 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP124-201ENST00000362739 110 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 Y_RNA.88-201ENST00000363029 99 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-188P-201ENST00000364207 107 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 SMIM11P1-201ENST00000369586 178 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 FGF7P8-201ENST00000402994 292 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC008850.1-201ENST00000427546 362 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 MTATP6P23-201ENST00000440153 476 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 BNIP3P2-201ENST00000441221 577 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RNU7-63P-201ENST00000459054 62 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 GMFBP1-201ENST00000467831 427 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC092451.1-201ENST00000480211 153 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 SNORA31.3-201ENST00000516029 96 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RNU6-390P-201ENST00000516259 103 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 RN7SKP258-201ENST00000517151 304 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AP006587.4-201ENST00000526053 529 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 MIR3921-201ENST00000577308 85 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC110741.2-201ENST00000605278 268 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 AC006020.1-201ENST00000420179 1854 ntBASIC3.5□□□□□ -1.85
TCRBV7S3A2A0A539 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 PNPT1P2-201ENST00000456768 2050 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AL139276.1-201ENST00000311910 1001 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 XIAPP3-201ENST00000312918 795 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP197-201ENST00000363357 119 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNY3P3-201ENST00000363816 102 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP479-201ENST00000364858 117 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 Y_RNA.295-201ENST00000364918 102 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 SNORA69-201ENST00000383895 132 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RPL21P17-201ENST00000397467 475 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 NDUFS5P1-201ENST00000405668 289 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP239-201ENST00000410218 129 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RNA5SP31-201ENST00000411144 127 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC114491.1-201ENST00000416095 246 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AL356968.1-201ENST00000416622 474 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 AC018630.2-202ENST00000422992 927 ntBASIC3.49□□□□□ -1.85
TCRBV7S3A2A0A539 RPL21P66-201ENST00000426566 466 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms