Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AL161729.3-201ENST00000603533 673 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AC104662.1-201ENST00000604448 511 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SNORD39.4-201ENST00000620099 78 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 MAPK10-303ENST00000641324 3959 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 AL731532.2-201ENST00000623542 1953 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.4□□□□□ -1.71
CCDC163A0A0D9SF12 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC008568.2-201ENST00000623862 2313 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 Y_RNA.167-201ENST00000363735 109 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 Y_RNA.245-201ENST00000364493 95 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MIR670-201ENST00000390142 98 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MIR450B-201ENST00000401182 78 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC108032.1-201ENST00000416706 207 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MTND1P14-201ENST00000427400 950 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AL669831.1-202ENST00000428504 417 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 GPM6BP2-201ENST00000432046 144 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 GTF2IP13-201ENST00000438487 386 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AF228730.2-201ENST00000438784 848 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RPL23AP52-201ENST00000439311 478 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 GPM6BP1-201ENST00000446387 144 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RNU7-167P-201ENST00000459160 62 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RPL23AP62-201ENST00000463396 453 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MTND4P17-201ENST00000470444 350 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 KC877373.1-201ENST00000479066 408 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 TRBVA-201ENST00000498804 316 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RNU6-864P-201ENST00000516256 108 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RNA5SP49-201ENST00000516450 115 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RNA5SP291-201ENST00000517222 105 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 TVP23BP1-201ENST00000557500 617 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC087477.6-201ENST00000559595 843 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 CYCSP40-201ENST00000575927 294 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MIR3941-201ENST00000582572 103 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC008739.3-201ENST00000603262 127 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AL161798.1-201ENST00000604630 131 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 RNU4-89P-201ENST00000607443 133 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC103705.1-201ENST00000619013 241 ntBASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC163A0A0D9SF12 AC121333.1-201ENST00000567488 2709 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 Y_RNA.384-201ENST00000383909 102 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 MIR301A-201ENST00000385261 86 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 NCOR1P3-201ENST00000420479 303 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC104333.2-201ENST00000422630 192 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 NDUFB4P7-201ENST00000423198 363 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 RPL7P43-201ENST00000478876 753 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 SUMO2P6-201ENST00000505273 288 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC099522.1-202ENST00000514718 367 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 RNA5SP143-201ENST00000516936 115 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 MIR548AC-201ENST00000585049 88 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AL353621.2-201ENST00000605340 133 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AL022345.1-201ENST00000607292 135 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC090132.2-201ENST00000615881 347 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 MAPK10-320ENST00000641462 6696 ntBASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.38□□□□□ -1.71
CCDC163A0A0D9SF12 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC163A0A0D9SF12 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC163A0A0D9SF12 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC163A0A0D9SF12 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC163A0A0D9SF12 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms