Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-500P-201ENST00000362349 107 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MIR592-201ENST00000384959 97 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MIR27B-201ENST00000385129 97 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MIR493-201ENST00000385254 89 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AF228730.1-201ENST00000397972 663 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MTCYBP36-201ENST00000404146 440 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 RNU2-71P-201ENST00000411395 189 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MTCO1P17-201ENST00000411522 491 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC078974.1-201ENST00000411597 223 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 RPS15AP38-201ENST00000413110 372 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 HMGB1P11-201ENST00000413899 637 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC080125.1-201ENST00000414888 684 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 USP9YP20-201ENST00000419224 558 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 OOSP1P1-201ENST00000423265 274 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC092447.3-201ENST00000426027 686 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MYL8P-204ENST00000431574 518 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 SNRPEP7-201ENST00000438350 220 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 RPL31P60-201ENST00000478450 367 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC098862.1-201ENST00000504991 413 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 RNU6-798P-201ENST00000516912 103 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 CKS1BP7-201ENST00000522230 235 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AP004247.1-201ENST00000531556 1289 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC145350.1-201ENST00000567426 208 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 ROCK1P1-201ENST00000573767 549 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC060771.1-201ENST00000582031 164 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC012443.1-201ENST00000605605 231 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 TUG1_1.1-201ENST00000610654 145 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 CTSLP2-204ENST00000629029 392 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 MTND5P33-201ENST00000571250 1450 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 CCT4P2-201ENST00000233836 1548 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 ELF2P3-201ENST00000445099 1506 ntBASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.06□□□□□ -2.08
TRAV40A0A0B4J280 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 Z82195.2-201ENST00000612348 18351 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RNU1-100P-201ENST00000365255 165 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AP000567.1-201ENST00000406413 156 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RN7SKP266-201ENST00000410232 287 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RNU4-72P-201ENST00000410754 173 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 TPMTP3-201ENST00000411928 735 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL096701.2-201ENST00000416920 238 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 PPP1R11P2-201ENST00000423543 382 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 MTND5P25-201ENST00000430499 799 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 FCF1P1-201ENST00000432690 571 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC004866.2-201ENST00000438285 481 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 TPT1P14-201ENST00000448018 505 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL359385.1-201ENST00000456509 365 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 MTCO1P42-201ENST00000457379 726 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RPS27AP1-201ENST00000475545 471 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RPL23AP45-201ENST00000476406 468 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 TRBV12-1-201ENST00000479785 344 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 MTND4LP22-201ENST00000508209 276 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AL512310.1-201ENST00000548639 172 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC091544.4-201ENST00000555268 342 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 RPL23AP84-201ENST00000571193 464 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 MIR4307-201ENST00000582802 84 ntBASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.05□□□□□ -2.08
TRAV40A0A0B4J280 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms