Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AC116337.2-201ENST00000477662 156 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 SNORA48.10-201ENST00000516965 160 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 SCARNA11.3-201ENST00000517276 130 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 HMGB1P14-201ENST00000557424 591 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 PRR13P7-201ENST00000605538 430 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 AL050343.2-201ENST00000607338 280 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 uc_338.12-201ENST00000616344 181 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 HOTTIP_4.1-201ENST00000618195 165 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 AP003400.5-201ENST00000624827 617 ntBASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.84□□□□□ -2.27
TRAV21A0A0B4J279 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
TRAV21A0A0B4J279 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 RNU1-17P-201ENST00000363022 152 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 SNORA7.1-201ENST00000363750 139 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 U8.10-201ENST00000384260 133 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 OR6C66P-201ENST00000414917 930 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 LUZP4P1-201ENST00000415420 344 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 RPL30P13-201ENST00000418873 348 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 RNU7-23P-201ENST00000459465 62 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC114801.2-201ENST00000503825 781 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC091917.2-201ENST00000505002 744 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 PCNAP1-201ENST00000505363 709 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 CBX3P3-201ENST00000508108 532 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 GNAI2P1-201ENST00000541815 315 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 MIR4295-201ENST00000585286 85 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC097655.1-201ENST00000635075 318 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 AC010329.5-201ENST00000623497 2174 ntBASIC0.83□□□□□ -2.28
TRAV21A0A0B4J279 RNU6-457P-201ENST00000363999 107 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 SNORD14B-201ENST00000364533 90 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC234781.2-201ENST00000426370 994 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC010095.1-201ENST00000443543 144 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC025918.2-201ENST00000558683 763 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AL353770.2-201ENST00000620024 78 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AC241585.2-209ENST00000638217 143 ntBASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV21A0A0B4J279 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 RNU6-374P-201ENST00000364146 108 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 Y_RNA.493-201ENST00000384422 102 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 RPL23AP29-201ENST00000397284 453 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 OFD1P18Y-201ENST00000420889 959 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 OR52A4P-202ENST00000481634 799 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 YWHAEP4-201ENST00000505390 198 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AC084364.2-201ENST00000546924 395 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AC098826.3-201ENST00000603823 466 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AL391813.2-201ENST00000609113 322 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AC092140.2-201ENST00000618027 521 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 AP002791.1-201ENST00000623291 381 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 NSRP1P1-201ENST00000444067 1693 ntBASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV21A0A0B4J279 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 ZNF29P-201ENST00000225587 168 ntBASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 RNU6-1243P-201ENST00000364028 107 ntBASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 MT-TC-201ENST00000387405 66 ntBASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 BTF3L4P2-201ENST00000392798 346 ntBASIC0.8□□□□□ -2.28
TRAV21A0A0B4J279 RN7SKP158-201ENST00000410453 326 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms