Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC104229.1-201ENST00000561364 255 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AP001429.1-201ENST00000602568 530 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC009314.1-201ENST00000603871 304 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC068276.1-201ENST00000605793 379 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC007349.4-201ENST00000608114 532 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC005296.1-201ENST00000616145 209 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 U4atac.1-201ENST00000618345 95 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC008443.7-201ENST00000622195 246 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 AC006020.1-201ENST00000420179 1854 ntBASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.51□□□□□ -2.17
TRAV4A0A0B4J268 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 MTND5P30-201ENST00000452896 1731 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 SNORD65C-201ENST00000390962 71 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AL133264.1-201ENST00000407157 562 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC008173.1-201ENST00000418901 264 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC244453.4-201ENST00000419150 388 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 ZNF90P2-204ENST00000419323 1075 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 XKRYP1-201ENST00000423438 492 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 HMGN2P19-201ENST00000425149 265 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 RPS3AP44-201ENST00000425466 790 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC008850.1-201ENST00000427546 362 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC007919.1-201ENST00000429380 217 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 XKRYP2-201ENST00000432915 492 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 UBE2D3P1-201ENST00000436669 444 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AL021397.1-201ENST00000451806 248 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 RN7SL274P-201ENST00000492268 272 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 HMGB3P17-201ENST00000504195 649 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 OR11H5P-201ENST00000554039 926 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 MIR4672-201ENST00000583126 81 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC005034.5-201ENST00000604219 466 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC092954.1-201ENST00000609121 445 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC004009.2-201ENST00000623016 728 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 PISRT1-201ENST00000626175 531 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 MIR4275-201ENST00000636486 87 ntBASIC1.5□□□□□ -2.17
TRAV4A0A0B4J268 AC008555.8-201ENST00000623602 2168 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 RNU6-1159P-201ENST00000362933 107 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 U8.14-201ENST00000390843 143 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AL109755.1-201ENST00000401791 649 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 U6atac.2-201ENST00000408644 118 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MTCO3P1-205ENST00000422088 832 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC246680.2-201ENST00000422106 389 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 BX276092.3-201ENST00000424182 230 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 VN1R42P-201ENST00000424651 344 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 RAC1P8-201ENST00000427086 527 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MTND2P5-201ENST00000432656 1006 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC234064.1-201ENST00000436312 247 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AL500527.1-201ENST00000448532 255 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 RPL23AP42-201ENST00000471152 471 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 RPL23AP41-201ENST00000484754 458 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC017037.2-201ENST00000513850 890 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MIR3126-201ENST00000577443 74 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MIR5002-201ENST00000584713 97 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AP000238.1-201ENST00000608759 426 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AL162233.1-201ENST00000620014 944 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 DUXAP9-208ENST00000622815 614 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 AL159972.1-201ENST00000625150 448 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 IGHVIII-44-202ENST00000636235 289 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 MTND5P6-201ENST00000422338 1798 ntBASIC1.49□□□□□ -2.17
TRAV4A0A0B4J268 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 RNU6-839P-201ENST00000363347 108 ntBASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 RNU6-657P-201ENST00000383904 107 ntBASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 UBE2V1P2-201ENST00000397758 440 ntBASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 BOLA3P4-201ENST00000418151 400 ntBASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 AC092634.6-201ENST00000418558 192 ntBASIC1.48□□□□□ -2.17
TRAV4A0A0B4J268 PTP4A1P7-201ENST00000423476 514 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms