Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 AC116312.1-201ENST00000606841 314 ntBASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 AC091925.2-201ENST00000625059 256 ntBASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 U6.98-201ENST00000637157 84 ntBASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 AL136360.1-201ENST00000503377 1900 ntBASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PCDHAC2Q9Y5I4 CCT4P2-201ENST00000233836 1548 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RNU6-989P-201ENST00000362756 107 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RPL7P25-201ENST00000404151 721 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 Y_RNA.598-201ENST00000410480 95 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RPS3AP3-201ENST00000411933 242 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 USP9YP13-201ENST00000417797 480 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 MTND6P13-201ENST00000443510 523 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RPL7P36-201ENST00000444633 681 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AL109933.2-201ENST00000452651 260 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AL033528.1-201ENST00000453780 140 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 Z82190.1-201ENST00000454534 490 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC126182.1-201ENST00000478134 357 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AL049830.2-201ENST00000480072 201 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RPS4XP13-201ENST00000483219 789 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RPL9P6-201ENST00000492764 598 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 COX7A2P2-201ENST00000505291 250 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC008549.1-201ENST00000512900 643 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RN7SKP244-201ENST00000516513 307 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AC087883.1-201ENST00000551882 391 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 AL022154.1-201ENST00000604698 785 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RBM11P1-201ENST00000604951 799 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PCDHAC2Q9Y5I4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC233263.6-201ENST00000631132 1963 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL049780.3-201ENST00000624612 1583 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 GABPAP-201ENST00000419271 1356 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 FTLP6-201ENST00000355274 422 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RNU6-97P-201ENST00000363387 104 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 U3.29-201ENST00000391296 212 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RN7SKP285-201ENST00000410137 318 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 HMGB3P23-201ENST00000414981 585 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 ARF4P2-201ENST00000430209 526 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC009961.2-201ENST00000435771 251 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RPL22P17-201ENST00000438729 315 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RPS12P18-201ENST00000442381 270 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL353572.1-201ENST00000442490 417 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 GAPDHP17-201ENST00000449858 1001 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RPS20P32-201ENST00000456044 356 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC034222.1-201ENST00000494052 532 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 TXNP6-201ENST00000510190 310 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC093677.1-201ENST00000514414 678 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RNU2-58P-201ENST00000516403 183 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 RNU6-430P-201ENST00000517078 107 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 MTCYBP41-201ENST00000528913 1123 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC011602.1-201ENST00000546484 331 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC136619.2-201ENST00000563361 631 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 ZNF192P1-203ENST00000565888 810 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 ELOCP29-201ENST00000588193 334 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 HMGN1P30-201ENST00000589286 268 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL669831.4-202ENST00000590817 238 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 BNIP3P8-201ENST00000597863 560 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AL353621.2-201ENST00000605340 133 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 AC092954.2-201ENST00000609103 430 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.56□□□□□ -1.84
PCDHAC2Q9Y5I4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms