Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RPL39P36-201ENST00000490784 156 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC078918.1-201ENST00000498515 228 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 MTCO2P30-201ENST00000503662 364 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 RNU7-143P-201ENST00000516781 65 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 IGKV2-38-201ENST00000517443 247 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 OR5B19P-201ENST00000531766 928 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 SNRPGP16-201ENST00000533275 226 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC135001.1-201ENST00000544546 283 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 RPL23AP87-202ENST00000573039 466 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC005255.1-201ENST00000593748 216 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AL355810.1-201ENST00000614629 552 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC112487.2-201ENST00000637950 304 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 AC116096.1-201ENST00000566804 2314 ntBASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHB1Q9Y5F3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 Y_RNA.509-201ENST00000384506 99 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MIR200C-201ENST00000384980 68 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 RNU4-46P-201ENST00000410818 138 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 TOMM22P1-201ENST00000418578 312 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-953P-201ENST00000459154 107 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AC092451.1-201ENST00000480211 153 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 HSPE1P5-201ENST00000561489 272 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MIR3921-201ENST00000577308 85 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MIR5684-201ENST00000585074 65 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AL606490.9-201ENST00000603331 271 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 MARK2P15-201ENST00000432204 2186 ntBASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHB1Q9Y5F3 AL133412.1-201ENST00000380194 2992 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 SNORD74.4-201ENST00000364129 80 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 Y_RNA.231-201ENST00000364358 102 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 SNORA51.2-201ENST00000364595 132 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNA5SP167-201ENST00000365461 116 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-767P-201ENST00000384132 107 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-332P-201ENST00000391193 108 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RN7SKP177-201ENST00000410567 355 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RN7SKP140-201ENST00000411196 284 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RPL7P46-201ENST00000425129 740 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 HMGB1P27-201ENST00000431429 603 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 ERLEC1P1-201ENST00000433806 578 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AL118520.1-201ENST00000450770 291 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AL162395.1-201ENST00000457882 422 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-677P-201ENST00000516914 101 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-685P-201ENST00000517088 95 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 MIR5685-201ENST00000579080 79 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 MIR3944-201ENST00000581277 108 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC008739.3-201ENST00000603262 127 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AL359547.2-201ENST00000615810 418 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 MIR7151-201ENST00000617477 60 ntBASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHB1Q9Y5F3 AC012442.3-202ENST00000636742 206 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms