Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MTND4P2-201ENST00000507767 1203 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC109464.2-201ENST00000510242 943 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC010186.2-204ENST00000537668 439 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC092470.1-201ENST00000546187 132 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AC023813.2-201ENST00000564321 469 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
AP4S1Q9Y587 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.2□□□□□ -2.22
AP4S1Q9Y587 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 MIR449A-201ENST00000362113 91 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 U8.2-201ENST00000363156 134 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 LINC00933-203ENST00000559812 219 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 AL078605.1-201ENST00000603529 500 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 AL022099.1-201ENST00000604551 712 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 RMST_6.1-201ENST00000611980 203 ntBASIC1.19□□□□□ -2.22
AP4S1Q9Y587 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
AP4S1Q9Y587 DSTNP4-201ENST00000399472 474 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AL606490.8-201ENST00000441624 319 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 RPS29P21-201ENST00000496272 170 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 NRBF2P1-201ENST00000587407 859 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AL035411.2-201ENST00000604022 421 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC007038.2-201ENST00000608095 740 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.18□□□□□ -2.22
AP4S1Q9Y587 AC010329.5-201ENST00000623497 2174 ntBASIC1.18□□□□□ -2.22
AP4S1Q9Y587 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 RN7SKP158-201ENST00000410453 326 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 TATDN1P1-201ENST00000414123 891 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 OR51A5P-201ENST00000415429 942 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AC244636.1-201ENST00000421152 228 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 MTND5P25-201ENST00000430499 799 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 RPL31P53-201ENST00000457065 348 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 TRBV1-201ENST00000476502 284 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AC027575.1-201ENST00000481064 460 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AC111000.5-201ENST00000506559 1178 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 SEPT7P9-203ENST00000604116 343 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 AP001485.1-201ENST00000604799 199 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 MTND2P41-201ENST00000637599 773 ntBASIC1.17□□□□□ -2.22
AP4S1Q9Y587 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
AP4S1Q9Y587 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL136372.1-201ENST00000403060 228 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL356131.1-201ENST00000405826 414 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 RNU6-174P-201ENST00000410406 106 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL158823.1-201ENST00000418441 478 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 DNAJC19P4-201ENST00000440115 345 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 SUMO2P6-201ENST00000505273 288 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AC008676.3-201ENST00000521237 435 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 GNAI2P1-201ENST00000541815 315 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 CBX3P2-202ENST00000583365 535 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL645939.4-201ENST00000604495 135 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AC013468.1-201ENST00000608680 598 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AP003400.5-201ENST00000624827 617 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 AP005901.5-201ENST00000545779 1796 ntBASIC1.16□□□□□ -2.22
AP4S1Q9Y587 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
AP4S1Q9Y587 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
AP4S1Q9Y587 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
AP4S1Q9Y587 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
AP4S1Q9Y587 AL035407.1-201ENST00000429211 571 ntBASIC1.15□□□□□ -2.23
AP4S1Q9Y587 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.15□□□□□ -2.23
AP4S1Q9Y587 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.15□□□□□ -2.23
AP4S1Q9Y587 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms