Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.52□□□□□ -1.53
RTCBQ9Y3I0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 SNORD62.1-201ENST00000362541 86 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNA5SP175-201ENST00000364275 119 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 Y_RNA.307-201ENST00000365022 117 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNU6-715P-201ENST00000365204 103 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 Y_RNA.489-201ENST00000384410 101 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNU6-95P-201ENST00000384697 107 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNA5SP296-201ENST00000410523 111 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNA5SP111-201ENST00000411386 101 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RPS24P13-201ENST00000442520 397 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 BTF3P6-201ENST00000448054 499 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC007967.1-201ENST00000455422 1159 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 SNORD5.1-201ENST00000458800 75 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC008481.1-201ENST00000463278 396 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC117503.1-201ENST00000472241 394 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC104136.1-201ENST00000512969 394 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNU6-475P-201ENST00000516073 104 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RNU6-307P-201ENST00000516743 106 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 CYCSP27-201ENST00000527643 293 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 CR383656.7-201ENST00000548164 174 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC026371.1-201ENST00000551867 419 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL355812.1-201ENST00000603215 216 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL158032.1-201ENST00000605401 106 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC107871.2-201ENST00000612894 502 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AC007998.5-201ENST00000622938 237 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 AL031595.2-201ENST00000624215 19071 ntBASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.51□□□□□ -1.53
RTCBQ9Y3I0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 RNA5SP387-201ENST00000364226 106 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 RNU6-339P-201ENST00000384310 107 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 RNU4-70P-201ENST00000384579 139 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 RNA5SP372-201ENST00000390836 115 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC234775.1-201ENST00000454247 670 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 SCARNA16.2-201ENST00000516520 172 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC009852.2-201ENST00000567898 485 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AL031176.1-201ENST00000604554 466 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC039056.2-201ENST00000622261 511 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 AC005005.4-201ENST00000623789 16698 ntBASIC5.5□□□□□ -1.53
RTCBQ9Y3I0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 AL731532.2-201ENST00000623542 1953 ntBASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 DDX10P1-201ENST00000448545 1933 ntBASIC5.49□□□□□ -1.53
RTCBQ9Y3I0 MIR200C-201ENST00000384980 68 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms