Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 MIR6853-201ENST00000619642 74 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 PABPC1P7-201ENST00000413177 1513 ntBASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
AP4E1Q9UPM8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 SNORA58B-201ENST00000364259 136 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNU6-371P-201ENST00000364283 108 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNU6-806P-201ENST00000365147 105 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 MIR550A3-201ENST00000390735 95 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNU6-817P-201ENST00000391083 104 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 CYB5AP4-201ENST00000396692 399 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNA5SP56-201ENST00000410277 118 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RN7SKP267-201ENST00000410381 285 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 CYCSP10-201ENST00000417973 294 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC139712.2-201ENST00000424302 339 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC016831.4-201ENST00000438302 307 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RPS26P2-201ENST00000440331 348 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 EIF4A1P11-201ENST00000451239 222 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RPL21P41-201ENST00000459863 264 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 PPIAP21-201ENST00000464473 501 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RPL12P20-201ENST00000475538 479 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RPL31P60-201ENST00000478450 367 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 FO393415.2-201ENST00000480085 343 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC083982.1-201ENST00000485679 344 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RN7SL346P-201ENST00000491561 294 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 OR7H2P-201ENST00000513483 306 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 SNORA25.11-201ENST00000515935 105 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 SNORA31.3-201ENST00000516029 96 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNU6-390P-201ENST00000516259 103 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 HSPE1P20-201ENST00000538133 289 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC015912.2-201ENST00000571053 181 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RNF138P2-201ENST00000603490 592 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 FAM25E-202ENST00000608562 189 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 AC096772.1-201ENST00000609146 564 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 EOGT-210ENST00000615922 1931 ntBASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
AP4E1Q9UPM8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AL590240.1-201ENST00000334118 313 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RNA5SP87-201ENST00000384155 118 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 Y_RNA.515-201ENST00000384535 112 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RNU6-1156P-201ENST00000410365 100 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC140479.3-201ENST00000418944 1126 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC073063.1-201ENST00000434352 607 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 GEMIN8P3-201ENST00000445417 720 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 FCF1P4-201ENST00000448326 183 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AL031274.1-201ENST00000450334 232 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RN7SL610P-201ENST00000463845 291 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RPL39P38-201ENST00000467018 153 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AP000926.1-201ENST00000479573 241 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC018437.1-201ENST00000492214 406 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RPL36AP41-201ENST00000493820 306 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 AC137590.2-201ENST00000619709 240 ntBASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
AP4E1Q9UPM8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
AP4E1Q9UPM8 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.64
AP4E1Q9UPM8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
AP4E1Q9UPM8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
AP4E1Q9UPM8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.84□□□□□ -1.64
AP4E1Q9UPM8 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms