Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF807-201ENST00000328088 1707 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-490P-201ENST00000362985 107 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 SNORA2.3-201ENST00000383920 135 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-574P-201ENST00000384265 107 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RNY1P14-201ENST00000384426 108 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 UBE2V1P4-201ENST00000425374 344 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 MTCO1P39-201ENST00000426148 480 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AL160004.2-201ENST00000432935 350 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC236972.1-201ENST00000433225 199 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AL360271.2-201ENST00000447710 161 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC087588.1-201ENST00000462203 316 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RPL23AP2-201ENST00000471227 466 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC012158.1-204ENST00000483430 465 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 RPL21P129-201ENST00000491732 478 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC110792.1-201ENST00000491826 472 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC108145.1-201ENST00000503770 153 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC092436.3-201ENST00000511788 257 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 MTCO2P24-201ENST00000515611 426 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AF186190.1-201ENST00000517470 480 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC087369.1-201ENST00000520775 996 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC012339.2-201ENST00000523996 453 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 COX6CP5-201ENST00000527162 228 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC023442.1-201ENST00000531247 422 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 MIR3160-1-201ENST00000577972 85 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC011494.1-201ENST00000596454 237 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC002044.1-201ENST00000606707 158 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AL161423.1-201ENST00000613700 262 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AC007485.1-201ENST00000616755 206 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 SALL4P2-201ENST00000423288 2910 ntBASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP3Q9UKI2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 Y_RNA.80-201ENST00000362996 102 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-1303P-201ENST00000364841 107 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 Y_RNA.473-201ENST00000384333 102 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 Y_RNA.496-201ENST00000384444 101 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-331P-201ENST00000384724 107 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 U3.22-201ENST00000391120 215 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 SNORA77-201ENST00000408716 125 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RNA5SP146-201ENST00000410743 123 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RPL23AP1-201ENST00000428990 471 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RPS29P9-201ENST00000440360 171 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 BTF3P15-201ENST00000455606 336 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RNU7-138P-201ENST00000459479 64 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RN7SL41P-201ENST00000476144 297 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC084198.1-201ENST00000477747 402 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC090686.1-201ENST00000481577 749 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 GMPSP1-201ENST00000514075 579 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 RNU6-764P-201ENST00000516396 105 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC025423.5-201ENST00000550230 219 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 MIR5692A1-201ENST00000580523 69 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AC006006.1-201ENST00000603082 144 ntBASIC4.01□□□□□ -1.77
CDC42EP3Q9UKI2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms