Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP443-201ENST00000363083 132 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNA5SP175-201ENST00000364275 119 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 Y_RNA.395-201ENST00000383945 109 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-434P-201ENST00000384376 107 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 MIR559-201ENST00000385188 96 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 LAP3P1-201ENST00000403648 294 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AL583834.1-201ENST00000406943 343 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 MIR1911-201ENST00000410783 80 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 BX682237.1-201ENST00000415016 335 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 ATG3P1-201ENST00000419507 911 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RPL23AP69-201ENST00000431134 458 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 ATP5HP2-201ENST00000433885 485 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 FABP5P14-201ENST00000437273 393 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 HLA-N-201ENST00000437516 135 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 NEFMP1-201ENST00000443423 1006 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 MTND1P17-201ENST00000448961 204 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 FABP5P13-201ENST00000452144 328 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-953P-201ENST00000459154 107 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNU7-167P-201ENST00000459160 62 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AP000873.1-201ENST00000463987 400 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RPL35AP15-201ENST00000468042 339 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RN7SL303P-201ENST00000469773 251 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC079140.5-201ENST00000507882 310 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC093840.1-201ENST00000511599 336 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC023141.12-201ENST00000512399 199 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 RNU6-390P-201ENST00000516259 103 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 TRAV8-5-201ENST00000537369 341 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC069240.1-201ENST00000548774 375 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC126177.3-201ENST00000551839 688 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 SNORD84-203ENST00000584275 78 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AP001836.1-201ENST00000604675 523 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC080078.3-201ENST00000605407 463 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AC124303.1-201ENST00000605703 360 ntBASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PPARGC1AQ9UBK2 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PPARGC1AQ9UBK2 AC016588.2-201ENST00000632484 3021 ntBASIC4.46□□□□□ -1.69
PPARGC1AQ9UBK2 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNU1-15P-201ENST00000353977 144 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.135-201ENST00000363439 95 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 Y_RNA.202-201ENST00000364083 110 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-593P-201ENST00000364716 112 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RHOT1P2-201ENST00000366423 333 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-393P-201ENST00000384475 107 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNU6-738P-201ENST00000384531 106 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNA5SP219-201ENST00000390940 113 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RPL5P18-201ENST00000406671 891 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC004552.1-201ENST00000419089 348 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 SNAP23P1-201ENST00000433229 246 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RPL23AP52-201ENST00000439311 478 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC008264.1-201ENST00000447612 367 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 DYNLL1P5-201ENST00000467158 270 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RPS26P3-201ENST00000470205 348 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RPL7P43-201ENST00000478876 753 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC027575.1-201ENST00000481064 460 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC090543.2-201ENST00000483963 348 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC004057.1-201ENST00000485827 348 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC090096.1-201ENST00000489168 390 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC005741.1-201ENST00000511094 432 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 SNORA31.3-201ENST00000516029 96 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 RNU2-58P-201ENST00000516403 183 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 IFITM8P-201ENST00000522529 394 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 ELOCP31-201ENST00000540463 467 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AL121603.1-201ENST00000553815 142 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 CYP4A43P-201ENST00000568156 121 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 MIR3672-201ENST00000584290 82 ntBASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PPARGC1AQ9UBK2 AL355802.3-201ENST00000607571 545 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms