Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RPS4XP3-201ENST00000398541 413 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC009237.5-201ENST00000414271 501 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC091286.1-201ENST00000431233 461 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC079781.2-201ENST00000446424 169 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 MTCYBP1-201ENST00000454315 1119 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RNU7-170P-201ENST00000459303 61 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC078785.3-201ENST00000476607 425 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 KC877373.1-201ENST00000479066 408 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC007182.2-201ENST00000489251 402 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RPL30P5-201ENST00000494923 336 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC107401.1-201ENST00000503426 685 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RNU6-927P-201ENST00000516199 100 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RNU6-410P-201ENST00000517006 107 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC026403.1-201ENST00000518938 295 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC024220.1-201ENST00000603675 484 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC007363.1-201ENST00000604736 620 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC103710.3-201ENST00000608157 948 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC136475.10-201ENST00000620253 385 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 AC027309.3-201ENST00000623419 351 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.44□□□□□ -1.86
HCN3Q9P1Z3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC007785.2-201ENST00000598627 1916 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 SNORD9-201ENST00000362566 104 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 RNU6-741P-201ENST00000383889 107 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 SYF2P2-201ENST00000417620 583 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 MED13P1-201ENST00000428342 171 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC073464.1-201ENST00000429823 534 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 MTCO2P11-201ENST00000431069 680 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AL512844.2-201ENST00000433990 593 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 HMGB3P12-201ENST00000438745 556 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 FABP5P13-201ENST00000452144 328 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AL136097.1-201ENST00000456945 913 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 RPS20P22-201ENST00000473700 357 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC117522.1-201ENST00000509821 380 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 SNORA70.18-201ENST00000516696 98 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 OR5G4P-201ENST00000525251 760 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC067852.3-201ENST00000589177 561 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC010591.1-201ENST00000603941 649 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AL121992.2-201ENST00000606262 256 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 AC007684.1-201ENST00000609671 477 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 OR5H6-203ENST00000642105 978 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 FAM35BP-202ENST00000497389 3337 ntBASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HCN3Q9P1Z3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC002546.1-201ENST00000588041 2504 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RNU6-946P-201ENST00000383878 107 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 MIR1-2-201ENST00000384961 85 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RN7SKP285-201ENST00000410137 318 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPS29P4-201ENST00000414733 161 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 Z85995.1-201ENST00000415547 335 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPL21P109-201ENST00000422213 475 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 RPS20P5-201ENST00000434808 360 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 HSPD1P21-201ENST00000436541 245 ntBASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.42□□□□□ -1.86
HCN3Q9P1Z3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms