Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 AC006130.2-201ENST00000586202 326 ntBASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 SNRPGP15-201ENST00000600149 222 ntBASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 MIR3976-201ENST00000606807 139 ntBASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 AP002826.1-201ENST00000608835 315 ntBASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 AC006133.1-201ENST00000617106 264 ntBASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.22□□□□□ -1.57
CXXC1Q9P0U4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.21□□□□□ -1.57
CXXC1Q9P0U4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.57
CXXC1Q9P0U4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
CXXC1Q9P0U4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
CXXC1Q9P0U4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.21□□□□□ -1.57
CXXC1Q9P0U4 NCAPGP1-201ENST00000505112 1814 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 MTND5P27-201ENST00000428871 1720 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.48-201ENST00000362710 103 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.210-201ENST00000364161 110 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.245-201ENST00000364493 95 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.526-201ENST00000384572 110 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 GNG5P5-201ENST00000420444 220 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 COX6CP13-201ENST00000428703 226 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AL162591.2-201ENST00000449634 317 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AL691482.1-201ENST00000453255 87 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 RNU6-1256P-201ENST00000516539 103 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.687-201ENST00000516558 91 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.715-201ENST00000517082 110 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AP000827.1-201ENST00000527814 258 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC022882.1-201ENST00000532142 501 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC006363.1-201ENST00000603806 463 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AC062037.2-201ENST00000610137 73 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AL442067.1-201ENST00000613261 223 ntBASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CXXC1Q9P0U4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RNU1-94P-201ENST00000362627 173 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RN7SKP185-201ENST00000362813 326 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.106-201ENST00000363189 100 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RNU4-42P-201ENST00000364738 142 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AL591034.2-201ENST00000402839 359 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AL035079.1-201ENST00000405210 287 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RPL19P16-201ENST00000433839 588 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RPL12P18-201ENST00000437175 325 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RPL23AP24-201ENST00000458203 385 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 U8.21-201ENST00000459536 136 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RPS17P2-201ENST00000461663 408 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC093852.1-201ENST00000503587 266 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 Y_RNA.668-201ENST00000516233 93 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 RNY3P15-201ENST00000516297 97 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC144568.1-201ENST00000520139 137 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 CPDP1-201ENST00000579660 283 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 MIR3158-1-201ENST00000583596 81 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 ARF4P1-201ENST00000605447 541 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC114781.5-201ENST00000615297 108 ntBASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.2□□□□□ -1.58
CXXC1Q9P0U4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXXC1Q9P0U4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXXC1Q9P0U4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.19□□□□□ -1.58
CXXC1Q9P0U4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CXXC1Q9P0U4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
CXXC1Q9P0U4 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms