| NLGN3 | Q9NZ94 | AC233728.2-201 | ENST00000425348 | 757 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL356583.2-201 | ENST00000426536 | 280 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | VN1R108P-201 | ENST00000431580 | 830 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC097347.1-201 | ENST00000438499 | 517 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL121871.1-201 | ENST00000443413 | 436 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | TPT1P14-201 | ENST00000448018 | 505 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | TEX41-209 | ENST00000451478 | 452 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LINC00374-201 | ENST00000454780 | 800 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC004924.1-201 | ENST00000480160 | 781 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC108860.1-201 | ENST00000484521 | 383 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | CBX3P3-201 | ENST00000508108 | 532 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC026801.2-201 | ENST00000515352 | 425 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC022447.1-201 | ENST00000515358 | 464 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC107909.2-201 | ENST00000520844 | 493 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC092745.2-201 | ENST00000537764 | 620 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AP005205.1-201 | ENST00000563503 | 508 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RSL24D1P11-201 | ENST00000591045 | 491 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | TPMTP1-201 | ENST00000592307 | 737 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC008739.1-201 | ENST00000598137 | 575 nt | TSL 2 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNF219-AS1-205 | ENST00000605996 | 792 nt | TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL158211.4-201 | ENST00000606988 | 584 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC108747.1-201 | ENST00000609508 | 535 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC092140.2-201 | ENST00000618027 | 521 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC091903.1-201 | ENST00000624322 | 454 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | PIK3C2G-202 | ENST00000433979 | 4840 nt | APPRIS P1 TSL 5 BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RAPGEF6-202 | ENST00000308008 | 4176 nt | TSL 1 (best) BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC011460.1-201 | ENST00000636268 | 1834 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC103988.1-201 | ENST00000566382 | 2177 nt | BASIC | 3 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LINC01376-202 | ENST00000424895 | 1949 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | ADGRG7-202 | ENST00000475887 | 2035 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AKAP14-201 | ENST00000334356 | 608 nt | APPRIS ALT2 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNU6-1078P-201 | ENST00000364522 | 103 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | SNORD67-201 | ENST00000390833 | 111 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | UBE2V1P2-201 | ENST00000397758 | 440 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNU6-1077P-201 | ENST00000410506 | 102 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | MYO16-AS2-201 | ENST00000412809 | 436 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL365277.2-201 | ENST00000415255 | 551 nt | TSL 3 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | NDUFB4P5-201 | ENST00000415445 | 361 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RPL7P46-201 | ENST00000425129 | 740 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC010153.1-201 | ENST00000432862 | 727 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC097662.1-205 | ENST00000433324 | 241 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC009969.1-201 | ENST00000438726 | 172 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL049734.2-201 | ENST00000441066 | 616 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL022238.1-201 | ENST00000442557 | 355 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RAC1P7-201 | ENST00000445367 | 377 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | MTND1P29-201 | ENST00000448112 | 647 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC093392.2-201 | ENST00000450682 | 337 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL590365.1-201 | ENST00000450788 | 243 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AP1S2P1-201 | ENST00000457344 | 379 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNA5SP310-201 | ENST00000459084 | 116 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | PDCD10-214 | ENST00000487947 | 716 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC055855.1-201 | ENST00000489563 | 579 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | SNORD59.2-201 | ENST00000516873 | 68 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | C11orf1-204 | ENST00000530214 | 599 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AP002993.1-201 | ENST00000538624 | 210 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC087260.1-201 | ENST00000546118 | 401 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC123904.2-201 | ENST00000548059 | 300 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC125611.2-201 | ENST00000551907 | 647 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC023510.1-201 | ENST00000555862 | 490 nt | TSL 2 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC119751.7-201 | ENST00000600494 | 245 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC073544.2-201 | ENST00000601155 | 540 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC012443.1-201 | ENST00000605605 | 231 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC138749.5-201 | ENST00000611461 | 208 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | TMBIM4-213 | ENST00000613669 | 851 nt | TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL450472.3-201 | ENST00000615578 | 367 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC116165.2-201 | ENST00000616705 | 206 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC112204.3-201 | ENST00000623822 | 332 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL603839.4-201 | ENST00000624658 | 1005 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC099654.13-201 | ENST00000639774 | 207 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | FAM35BP-202 | ENST00000497389 | 3337 nt | BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | NBPF20-202 | ENST00000392971 | 18450 nt | APPRIS P2 TSL 5 BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LPP-221 | ENST00000618621 | 18277 nt | TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LPP-222 | ENST00000640853 | 18277 nt | APPRIS P1 TSL 1 (best) BASIC | 2.99 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | SLC30A6-202 | ENST00000357055 | 4758 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | CCDC178-213 | ENST00000583930 | 3094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | C1orf141-202 | ENST00000371006 | 2053 nt | APPRIS P3 TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LINC00301-201 | ENST00000320202 | 852 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | FGF7P2-201 | ENST00000332473 | 296 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | Y_RNA.553-201 | ENST00000384670 | 102 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNY3P10-201 | ENST00000384764 | 102 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | MIR19A-201 | ENST00000384878 | 82 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL136372.1-201 | ENST00000403060 | 228 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | FAT1P1-201 | ENST00000406588 | 507 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNU2-43P-201 | ENST00000410306 | 190 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | Y_RNA.608-201 | ENST00000410647 | 95 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL357375.1-201 | ENST00000424274 | 525 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL162734.1-201 | ENST00000432858 | 157 nt | TSL 5 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL031667.1-201 | ENST00000440222 | 725 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC020743.3-201 | ENST00000440351 | 360 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL445524.1-202 | ENST00000440665 | 416 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | MTCO1P19-201 | ENST00000443487 | 500 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | USP9YP29-201 | ENST00000445112 | 563 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | LINC01445-202 | ENST00000458615 | 679 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AC025244.2-201 | ENST00000509215 | 422 nt | TSL 3 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | RNU6-798P-201 | ENST00000516912 | 103 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | NDST1-AS1-201 | ENST00000519040 | 368 nt | TSL 2 BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 2.98 | □□□□□ -1.93 | | |
| NLGN3 | Q9NZ94 | AL133271.1-201 | ENST00000538229 | 291 nt | BASIC | 2.98 | □□□□□ -1.93 | | |