Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 snoU13.28-201ENST00000459235 104 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC083798.1-201ENST00000472671 131 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 RN7SL860P-201ENST00000473738 223 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 EIF4EP3-201ENST00000498782 656 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC019235.1-201ENST00000503847 207 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 RBBP4P6-201ENST00000508098 202 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC098591.2-201ENST00000510152 315 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AF213884.2-201ENST00000510417 903 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC026726.1-201ENST00000512859 601 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 Y_RNA.693-201ENST00000516641 110 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 RNU6-1315P-201ENST00000517187 99 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AP003730.1-201ENST00000524605 285 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC104383.1-201ENST00000530297 370 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC091516.1-201ENST00000549191 703 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 TPRKBP2-201ENST00000565969 475 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC008745.1-201ENST00000604064 271 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC007621.1-201ENST00000604544 437 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 AC126118.1-201ENST00000607744 628 ntBASIC4.17□□□□□ -1.74
DDX56Q9NY93 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX56Q9NY93 FRG1CP-201ENST00000358464 769 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 RNU6-996P-201ENST00000365438 107 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 Y_RNA.554-201ENST00000384672 102 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC099548.1-201ENST00000421443 426 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 HMGN2P30-201ENST00000423237 256 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AL160275.3-201ENST00000423876 471 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC007389.2-201ENST00000434630 306 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC010099.1-201ENST00000455434 375 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 RPL36AP51-201ENST00000487216 318 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC025678.1-201ENST00000567861 338 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 MIR4703-201ENST00000577728 79 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 MIR1273C-201ENST00000578669 77 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 MIR3138-201ENST00000585238 82 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AC119501.1-201ENST00000603646 475 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 AL109618.2-201ENST00000605527 211 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 AL354950.2-201ENST00000617939 290 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX56Q9NY93 MTND5P7-201ENST00000413558 1798 ntBASIC4.16□□□□□ -1.74
DDX56Q9NY93 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX56Q9NY93 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.16□□□□□ -1.74
DDX56Q9NY93 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
DDX56Q9NY93 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.15□□□□□ -1.74
DDX56Q9NY93 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.15□□□□□ -1.74
DDX56Q9NY93 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
DDX56Q9NY93 RNU6-395P-201ENST00000365662 106 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AL606489.2-201ENST00000433886 234 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC083863.1-201ENST00000438811 231 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC104058.1-201ENST00000448028 297 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 RPL37P4-201ENST00000448908 268 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 ELOCP23-201ENST00000452014 332 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 RPL12P25-201ENST00000455592 494 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AL163973.1-201ENST00000484753 577 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC117522.3-201ENST00000507974 584 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC010342.1-201ENST00000514047 877 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 MTND4LP26-201ENST00000518144 282 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
DDX56Q9NY93 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 MIR4284-201ENST00000578924 81 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC110741.2-201ENST00000605278 268 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 MIR6868-201ENST00000611215 58 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 AC004852.3-201ENST00000614131 326 ntBASIC4.15□□□□□ -1.75
DDX56Q9NY93 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms