Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 SNRPFP4-201ENST00000456366 242 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL590639.1-201ENST00000456484 337 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC011825.1-201ENST00000484967 388 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RN7SL20P-201ENST00000488827 297 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNU2-46P-201ENST00000517038 113 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 RNU6-201P-201ENST00000517100 61 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC125611.2-201ENST00000551907 647 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 CKS1BP3-201ENST00000600888 237 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC068790.3-201ENST00000602988 553 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC008739.3-201ENST00000603262 127 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL359999.1-201ENST00000604513 294 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC090578.1-201ENST00000604955 591 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 TUG1_1.1-201ENST00000610654 145 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AL359198.2-201ENST00000611836 194 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AP001506.1-201ENST00000615444 211 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC108479.2-201ENST00000617314 601 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 AC091953.2-201ENST00000623979 160 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NDE1Q9NXR1 MAPK10-266ENST00000641066 6555 ntBASIC2.95□□□□□ -1.94
NDE1Q9NXR1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 MTCO1P9-201ENST00000505577 1534 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AP001350.1-201ENST00000601906 1524 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 GNG5P1-201ENST00000255500 204 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 RNU6-525P-201ENST00000363685 104 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 RNA5SP387-201ENST00000364226 106 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 SNORA70.4-201ENST00000365509 134 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 DEFB109C-201ENST00000382575 264 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 DEFB109B-201ENST00000382656 264 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 HMGN1P24-201ENST00000412282 298 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 BX842559.1-201ENST00000419615 532 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 USP9YP36-201ENST00000424581 829 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC233728.2-201ENST00000425348 757 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC007389.2-201ENST00000434630 306 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 RPL21P2-201ENST00000440049 481 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 NOTCH2P1-201ENST00000443481 624 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 ELOCP30-201ENST00000447108 299 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC096751.1-202ENST00000502691 1067 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC138853.1-201ENST00000503549 823 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC109464.2-201ENST00000510242 943 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 OR5G4P-201ENST00000525251 760 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AL391156.1-201ENST00000554965 554 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC009063.1-201ENST00000563342 702 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 MIR3118-1-201ENST00000581787 76 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 SNORD84-203ENST00000584275 78 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC068790.6-201ENST00000602558 258 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC073648.5-201ENST00000603502 305 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC091304.9-201ENST00000612091 226 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC010338.1-201ENST00000621823 717 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
NDE1Q9NXR1 AC092435.3-201ENST00000565538 3654 ntBASIC2.94□□□□□ -1.94
NDE1Q9NXR1 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 OR5J1P-201ENST00000313544 939 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 SNORD46.1-201ENST00000364139 104 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 Y_RNA.333-201ENST00000365274 102 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL357075.1-201ENST00000404107 726 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 RPS3AP24-201ENST00000407896 734 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.93□□□□□ -1.94
NDE1Q9NXR1 RPS7P15-201ENST00000415804 584 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 C1DP2-201ENST00000418167 426 ntBASIC2.93□□□□□ -1.94
NDE1Q9NXR1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms