Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AL359314.1-201ENST00000616913 261 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 MIR6891-201ENST00000618788 93 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AP004289.2-201ENST00000444413 1457 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 OR56B2P-202ENST00000641377 2453 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 UBE2L2-201ENST00000254302 429 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.142-201ENST00000363491 102 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 RNU6-741P-201ENST00000383889 107 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 SNORA70C-201ENST00000384538 135 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 RPS20P14-201ENST00000412545 360 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC091390.3-201ENST00000426478 338 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 RPL23AP89-201ENST00000439324 255 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 APOOP4-201ENST00000513530 597 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 RNU2-58P-201ENST00000516403 183 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 SNORA31.9-201ENST00000516429 84 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MIR2116-201ENST00000517221 80 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC107953.1-201ENST00000522216 297 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 RAB11AP2-201ENST00000545905 639 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AL118558.2-201ENST00000556294 238 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC084783.1-201ENST00000565846 910 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MIR3690-201ENST00000580266 75 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 MTND4P35-201ENST00000604257 1375 ntBASIC4.09□□□□□ -1.75
CCM2LQ9NUG4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.76
CCM2LQ9NUG4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.09□□□□□ -1.76
CCM2LQ9NUG4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 Y_RNA.378-201ENST00000365652 113 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AL590704.1-201ENST00000402856 794 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 Z85995.1-201ENST00000415547 335 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 CRYBB2P1-203ENST00000415709 538 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 BTF3L4P3-201ENST00000418879 476 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MARK2P15-201ENST00000432204 2186 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 IFNA20P-201ENST00000436840 528 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 RPL23AP93-201ENST00000440847 484 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 RPL23AP24-201ENST00000458203 385 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC091167.1-201ENST00000492017 396 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MTCO3P9-201ENST00000506989 781 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 FAM206BP-201ENST00000510179 541 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 RNU6-914P-201ENST00000516749 109 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 RNA5SP291-201ENST00000517222 105 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC004024.1-201ENST00000549244 247 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AL352979.3-201ENST00000553515 247 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC037471.2-201ENST00000564941 598 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC005668.1-201ENST00000571142 476 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MIR4429-201ENST00000580105 73 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MIR3138-201ENST00000585238 82 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 VN1R80P-201ENST00000597126 338 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AL117336.2-201ENST00000602435 335 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 HMGB1P50-201ENST00000605814 607 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 MIR15A-201ENST00000607334 83 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 U2.17-201ENST00000611454 95 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC064801.1-201ENST00000612025 407 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC090132.2-201ENST00000615881 347 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.08□□□□□ -1.76
CCM2LQ9NUG4 AC034229.5-201ENST00000624258 185 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms