Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC090607.5-201ENST00000615692 224 ntBASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 RN7SL544P-201ENST00000617232 284 ntBASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 RN7SL763P-201ENST00000620922 284 ntBASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.43□□□□□ -1.54
PRDM9Q9NQV7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AP005432.1-201ENST00000580891 3485 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC144833.1-201ENST00000567953 4089 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RNU6-961P-201ENST00000363893 105 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RNU6-818P-201ENST00000364837 108 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 MIR513C-201ENST00000401352 84 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 EBAG9P1-201ENST00000418955 543 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RPL12P39-201ENST00000455456 496 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC093840.1-201ENST00000511599 336 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RNA5SP165-201ENST00000517142 115 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC022790.1-201ENST00000522872 204 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AL670379.2-201ENST00000604983 252 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC022441.3-201ENST00000605737 136 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC005520.5-201ENST00000613926 164 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC005296.1-201ENST00000616145 209 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 AC008873.1-201ENST00000625051 138 ntBASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.42□□□□□ -1.54
PRDM9Q9NQV7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 RNU6-78P-201ENST00000362897 107 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 RNU6-1255P-201ENST00000363434 112 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 U3.10-201ENST00000364459 214 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MIR10B-201ENST00000385011 110 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MIR130A-201ENST00000385274 89 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 GNG5P5-201ENST00000420444 220 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 COX6B1P7-201ENST00000430845 235 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 IFNA11P-201ENST00000446352 526 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 RNU6-191P-201ENST00000516295 94 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC021678.3-201ENST00000517893 476 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MIR3614-201ENST00000581261 86 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 U73479.1-201ENST00000618062 168 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC127024.6-201ENST00000621598 424 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC027309.3-201ENST00000623419 351 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AC079776.5-201ENST00000641920 211 ntBASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRDM9Q9NQV7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PRDM9Q9NQV7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
PRDM9Q9NQV7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRDM9Q9NQV7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRDM9Q9NQV7 AC114774.1-201ENST00000507410 1770 ntBASIC5.4□□□□□ -1.54
PRDM9Q9NQV7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms