Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC023968.1-201ENST00000560719 475 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 MIR5571-201ENST00000577998 113 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC006111.3-201ENST00000622137 383 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC010894.1-201ENST00000313760 361 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 U3.3-201ENST00000362986 216 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 Y_RNA.458-201ENST00000384240 102 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 RNU6-472P-201ENST00000384299 107 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 Y_RNA.504-201ENST00000384481 104 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 Y_RNA.552-201ENST00000384665 112 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 MIR32-201ENST00000384965 70 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AL139100.1-201ENST00000408001 498 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 RNA5SP487-201ENST00000410186 122 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC091286.1-201ENST00000431233 461 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 RPL23AP22-201ENST00000437556 453 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 RANP2-201ENST00000456833 229 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC092324.1-201ENST00000468671 324 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 PPIAP15-201ENST00000479662 484 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 RNU6-1114P-201ENST00000516022 107 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC027544.3-201ENST00000535082 757 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC010928.2-201ENST00000588017 287 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 AC020656.2-201ENST00000613291 5309 ntBASIC6.84□□□□□ -1.31
RTN4Q9NQC3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RTN4Q9NQC3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
RTN4Q9NQC3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
RTN4Q9NQC3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
RTN4Q9NQC3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 RNA5SP295-201ENST00000362655 121 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 SNORA29-201ENST00000384183 140 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 RNU1-139P-201ENST00000391307 165 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL035422.1-201ENST00000414193 397 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 SNORD127-201ENST00000458892 86 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 RN7SL655P-201ENST00000486087 298 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 RN7SL714P-201ENST00000487050 298 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 SCARNA11.1-201ENST00000516918 132 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 IGHV4-55-201ENST00000520889 368 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC007458.1-201ENST00000542812 373 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 IGBP1P1-201ENST00000554337 1009 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC020916.2-201ENST00000591242 360 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AC108738.1-201ENST00000603703 237 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL096712.1-201ENST00000614561 159 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 MIR6849-201ENST00000618543 69 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 AL133243.3-201ENST00000617415 3004 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.83□□□□□ -1.32
RTN4Q9NQC3 LINC01355-201ENST00000566551 5444 ntBASIC6.83□□□□□ -1.32
RTN4Q9NQC3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 RNU6-212P-201ENST00000362642 104 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 RNU6-379P-201ENST00000363813 104 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 Y_RNA.376-201ENST00000365638 108 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 RNU6-748P-201ENST00000384648 107 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 RNU6-907P-201ENST00000390924 102 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RTN4Q9NQC3 LINC01399-202ENST00000458450 244 ntBASIC6.82□□□□□ -1.32
RTN4Q9NQC3 RN7SL350P-201ENST00000492591 299 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms