Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AP001646.1-201ENST00000527936 915 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC023813.2-201ENST00000564321 469 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AL356280.1-201ENST00000603614 379 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC024257.5-201ENST00000612739 531 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC104763.3-201ENST00000613765 618 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC023158.2-201ENST00000614876 543 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 MIR6715A-201ENST00000615929 79 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC079228.1-201ENST00000624774 1049 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.67□□□□□ -1.98
TM9SF3Q9HD45 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 ZNF29P-201ENST00000225587 168 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 MIR26A1-201ENST00000362205 77 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 SNORA38-201ENST00000363946 132 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 RNU6-1078P-201ENST00000364522 103 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 MRPS36P1-201ENST00000421291 307 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC007919.1-201ENST00000429380 217 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC112220.1-201ENST00000434628 355 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 snoU109.3-201ENST00000459477 145 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 MRPS17P3-201ENST00000465453 385 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC128713.1-201ENST00000471495 306 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC108734.3-201ENST00000481241 1165 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 HMGB1P28-201ENST00000507778 552 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 MTCYBP16-201ENST00000509187 1129 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 NDUFB4P2-201ENST00000509515 391 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC008413.1-201ENST00000511864 177 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 RNU1-104P-201ENST00000517280 175 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 HMGN1P28-201ENST00000521340 364 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 HMGN2P15-201ENST00000585707 270 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC069304.2-201ENST00000605154 435 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC008277.2-201ENST00000605196 797 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC103710.4-201ENST00000609301 899 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AL357080.1-201ENST00000617394 239 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AL590808.1-201ENST00000618696 141 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 LINC02211-204ENST00000642024 1070 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 AC093536.2-201ENST00000565257 1406 ntBASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TM9SF3Q9HD45 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TM9SF3Q9HD45 SNORA25.6-201ENST00000364121 118 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 RNU6-637P-201ENST00000384050 107 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 RNU6-925P-201ENST00000384629 104 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 Z75741.2-201ENST00000417272 1167 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 SEPT2P1-201ENST00000419651 180 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 HSFY7P-201ENST00000432672 318 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 HSFY8P-201ENST00000437934 318 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC002381.1-201ENST00000447049 280 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 HSFY5P-201ENST00000453726 309 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC008481.1-201ENST00000463278 396 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC105252.1-201ENST00000503089 286 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 RPL37P25-201ENST00000507308 276 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC093677.1-201ENST00000514414 678 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 RNU6-583P-201ENST00000516012 92 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 SCARNA11.3-201ENST00000517276 130 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AL512310.1-201ENST00000548639 172 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AL132657.2-201ENST00000564417 358 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AL603758.1-201ENST00000618654 241 ntBASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
TM9SF3Q9HD45 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 ELF2P3-201ENST00000445099 1506 ntBASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 Y_RNA.234-201ENST00000364409 97 ntBASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 SNORD116.1-201ENST00000365628 92 ntBASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 RNU6-140P-201ENST00000384566 108 ntBASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 SNORA67.4-201ENST00000384688 142 ntBASIC2.64□□□□□ -1.99
TM9SF3Q9HD45 AC007064.1-201ENST00000412238 351 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms