Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-581P-201ENST00000516214 105 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 RNU6-1256P-201ENST00000516539 103 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 RNA5SP441-201ENST00000516809 88 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 RNU7-70P-201ENST00000516941 66 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 MIR4271-201ENST00000582451 67 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 MIR3136-201ENST00000583498 78 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 AL596244.1-201ENST00000567068 3779 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 AP002364.1-201ENST00000623330 3386 ntBASIC7.08□□□□□ -1.28
RNF39Q9H2S5 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
RNF39Q9H2S5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 RNU6-478P-201ENST00000363904 110 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 SNORA67.2-201ENST00000384300 149 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 MIR9-2-201ENST00000384838 87 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 SNORD30.1-201ENST00000391309 70 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 AL035422.1-201ENST00000414193 397 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 CYCSP10-201ENST00000417973 294 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 CYP4F29P-201ENST00000420685 446 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 AC113367.2-201ENST00000505749 160 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 RNU2-35P-201ENST00000516446 142 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 AL133412.1-201ENST00000380194 2992 ntBASIC7.07□□□□□ -1.28
RNF39Q9H2S5 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.07□□□□□ -1.28
RNF39Q9H2S5 FAM91A3P-201ENST00000456826 2544 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC100757.1-201ENST00000616872 1835 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 SNORA2.2-201ENST00000365473 135 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RNA5SP354-201ENST00000391247 136 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RNA5SP431-201ENST00000410312 120 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AL161932.1-201ENST00000437408 146 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC245102.2-201ENST00000448956 180 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RN7SL362P-201ENST00000494228 267 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RPL23AP63-201ENST00000498752 471 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RNU6-693P-201ENST00000516134 107 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RNA5SP291-201ENST00000517222 105 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC005363.1-201ENST00000530779 351 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC004486.1-201ENST00000546846 233 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 MIR3683-201ENST00000580847 82 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC103810.7-201ENST00000607821 91 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AP001264.1-201ENST00000620602 703 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC123769.2-201ENST00000624332 5984 ntBASIC7.06□□□□□ -1.28
RNF39Q9H2S5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
RNF39Q9H2S5 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
RNF39Q9H2S5 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms