Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 MTND1P37-201ENST00000636562 264 ntBASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
POLR1EQ9GZS1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC099786.3-201ENST00000565735 1410 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 FTLP6-201ENST00000355274 422 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RNU6-525P-201ENST00000363685 104 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RNU6-636P-201ENST00000384598 107 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 U3.20-201ENST00000390909 217 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 U3.26-201ENST00000391236 204 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 UBE2FP1-201ENST00000416536 447 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 COX7BP2-201ENST00000437976 242 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 DPPA3P1-201ENST00000448050 469 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RPL26P9-201ENST00000457466 433 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 MRPS17P3-201ENST00000465453 385 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC008571.1-201ENST00000467232 300 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RN7SL297P-201ENST00000483161 293 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC022447.3-201ENST00000506865 495 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RNA5SP471-201ENST00000516971 106 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC090616.3-201ENST00000582184 217 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 VN1R90P-201ENST00000595717 726 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AC011458.1-201ENST00000604034 617 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 TUG1_2.1-201ENST00000614234 87 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 OR4G3P-201ENST00000633500 913 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 AL365361.1-201ENST00000566942 3481 ntBASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.69□□□□□ -1.98
POLR1EQ9GZS1 PABPC1P9-201ENST00000426076 1612 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL356057.3-201ENST00000402607 340 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MTCYBP38-201ENST00000417160 1123 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL451054.2-201ENST00000420896 202 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC019097.1-201ENST00000424783 735 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 DUXAP8-207ENST00000456786 622 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 SNORD109B-201ENST00000458961 67 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 SNORD109A-201ENST00000459128 67 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AP000852.1-201ENST00000472460 573 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC126182.1-201ENST00000478134 357 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC135721.1-201ENST00000497954 479 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MTND5P4-201ENST00000514978 288 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 SNORA31.18-201ENST00000517043 134 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL049838.1-201ENST00000563647 981 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 MTND1P8-201ENST00000571424 950 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 FTX_3.1-201ENST00000610451 147 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC034102.8-201ENST00000615146 484 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AC079228.1-201ENST00000624774 1049 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 AP000776.1-201ENST00000530032 1663 ntBASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
POLR1EQ9GZS1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU6-884P-201ENST00000363889 107 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU6-461P-201ENST00000364195 107 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU6-777P-201ENST00000364265 104 ntBASIC2.67□□□□□ -1.98
POLR1EQ9GZS1 RNU6-853P-201ENST00000364306 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms