Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AC034114.1-201ENST00000520293 285 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 BNIP3P1-201ENST00000547295 580 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 MIR1269B-201ENST00000580405 75 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 AP000787.2-201ENST00000604432 568 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
BHLHE41Q9C0J9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 OR4G2P-202ENST00000641004 1759 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 SPTLC1P2-201ENST00000407089 121 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 U3.42-201ENST00000408746 214 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AL158156.1-201ENST00000422509 473 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RPL21P91-201ENST00000429231 479 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC087650.1-201ENST00000431445 468 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 TDGF1P1-201ENST00000445734 527 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 IFNWP4-201ENST00000453148 294 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 LINC01399-202ENST00000458450 244 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC108145.1-201ENST00000503770 153 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC007016.1-201ENST00000512110 244 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-138P-201ENST00000515952 107 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC109329.1-201ENST00000518744 317 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC044860.2-201ENST00000561005 179 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 AC018445.2-201ENST00000622987 260 ntBASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BHLHE41Q9C0J9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR412-201ENST00000362142 91 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RNU1-76P-201ENST00000362903 159 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-595P-201ENST00000363944 107 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 SNORA58B-201ENST00000364259 136 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-200P-201ENST00000364743 107 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 SNORA70-201ENST00000384436 135 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR548H3-201ENST00000408771 118 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 Y_RNA.592-201ENST00000410274 109 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC079780.1-201ENST00000428259 207 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RPS27P18-201ENST00000431701 247 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 CFL1P1-202ENST00000432948 411 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RPS17P8-201ENST00000434525 335 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC009127.1-201ENST00000467090 155 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RPS23P1-201ENST00000491662 432 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MLLT10P2-201ENST00000506434 249 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC008958.1-201ENST00000511047 682 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RNU6-111P-201ENST00000517179 105 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC091144.1-201ENST00000519573 138 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 RRN3P3-201ENST00000549207 578 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC068446.3-201ENST00000555285 382 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR5701-3-201ENST00000578890 82 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR5701-1-201ENST00000585138 82 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AC012433.1-201ENST00000588916 398 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AL355877.2-201ENST00000603670 358 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AL161798.1-201ENST00000604630 131 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MIR5701-2-201ENST00000615634 82 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms